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contig_metadata

25 rows where bioproject = "PRJNA716463" and tax_clade = "Amoebozoa"

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tax_phylum 2

analysis 2

tax_superkingdom 1

tax_clade 1

  • Amoebozoa · 25 ✖

bioproject 1

  • PRJNA716463 · 25 ✖

tax_kingdom 0

Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
1983511 1983511 PRJNA716463_P_NODE_14102_length_321_cov_2.596774_g13686_i0 PRJNA716463 14102 321 2.596774 8.33564454 Acanthamoeba castellanii 5755 Discosea other_Eukaryota 383 9.399999999999996e-102   NTclustered gi|300078498|gb|GU001160.1| 5755 g13686 i0 88.615 22.7476635514019 325 24 100 10 1 321 6755 7070 Acanthamoeba castellanii 18S ribosomal RNA gene, partial sequence; internal transcribed spacer 1, 5.8S ribosomal RNA gene, and internal transcribed spacer 2, complete sequence; and 28S ribosomal RNA gene, partial sequence blastn 7302 383 1 Eukaryota Amoebozoa   Discosea   Longamoebia Acanthamoebidae Acanthamoeba Acanthamoeba castellanii
1984849 1984849 PRJNA716463_P_NODE_97922_length_253_cov_2.194444_g97505_i0 PRJNA716463 97922 253 2.194444 5.55194332 Planoprotostelium fungivorum 1890364 Evosea other_Eukaryota 139 1.17e-38   NR PRP82519.1 1890364 g97505 i0 80 0.948616600790514 80 16 94.9 0 253 14 139 218 PRP82519.1 ribosomal protein SA-like [Planoprotostelium fungivorum] diamond 240 139 1 Eukaryota Amoebozoa   Evosea Variosea Cavosteliida Cavosteliaceae Planoprotostelium Planoprotostelium fungivorum
7085779 7085779 PRJNA716463_P_NODE_100206_length_251_cov_1.730337_g99789_i0 PRJNA716463 100206 251 1.730337 4.34314587 Entamoeba gingivalis 38877 Evosea other_Eukaryota 464 2.47e-126   NTclustered gi|1200176483|gb|KX027297.1| 38877 g99789 i0 100 55.4183266932271 251 0 100 0 1 251 1530 1280 Entamoeba gingivalis strain gP11 small subunit ribosomal RNA gene and internal transcribed spacer 1, partial sequence blastn 13910 464 1 Eukaryota Amoebozoa   Evosea   Mastigamoebida Entamoebidae Entamoeba Entamoeba gingivalis
8845626 8845626 PRJNA716463_P_NODE_11187_length_355_cov_2.248227_g10772_i0 PRJNA716463 11187 355 2.248227 7.98120585 Acanthamoeba 5754 Discosea other_Eukaryota 656 0   NTclustered gi|576663737|gb|KF010846.1| 29195 g10772 i0 100 101.354929577465 355 0 100 0 1 355 378 24 Acanthamoeba griffini strain MYP2004 18S ribosomal RNA gene, partial sequence blastn 35981 656 1 Eukaryota Amoebozoa   Discosea   Longamoebia Acanthamoebidae Acanthamoeba Acanthamoeba griffini
11396171 11396171 PRJNA716463_P_NODE_100249_length_251_cov_1.730337_g99832_i0 PRJNA716463 100249 251 1.730337 4.34314587 Entamoeba 5758 Evosea other_Eukaryota 52.8 0.023   NTclustered gi|67466604|ref|XM_644358.1| 294381 g99832 i0 100 0.223107569721116 28 0 11 0 168 195 1890 1917 Entamoeba histolytica HM-1:IMSS long-chain-fatty-acid--CoA ligase, putative (EHI_188590), partial mRNA blastn 56 52.8 1 Eukaryota Amoebozoa   Evosea   Mastigamoebida Entamoebidae Entamoeba Entamoeba histolytica
19834920 19834920 PRJNA716463_P_NODE_46176_length_293_cov_3.554545_g45759_i0 PRJNA716463 46176 293 3.554545 10.41481685 Fuligo sp. BX-2002 211112 Evosea other_Eukaryota 512 1.04e-140   NTclustered gi|24711464|gb|AY145526.1| 211112 g45759 i0 97.987 13.4129692832764 298 1 100 1 1 293 997 700 Fuligo sp. BX-2002 18S ribosomal RNA gene, partial sequence blastn 3930 512 1 Eukaryota Amoebozoa   Evosea Eumycetozoa Physariida Physaraceae Fuligo Fuligo sp. BX-2002
19834947 19834947 PRJNA716463_P_NODE_47936_length_292_cov_2.100457_g47519_i0 PRJNA716463 47936 292 2.100457 6.13333444 Planoprotostelium fungivorum 1890364 Evosea other_Eukaryota 151 3.73e-40   NR PRP86903.1 1890364 g47519 i0 75 1.97260273972603 96 23 97.6 1 287 3 485 580 PRP86903.1 elongation factor 2-like isoform 1 [Planoprotostelium fungivorum] diamond 576 151 1 Eukaryota Amoebozoa   Evosea Variosea Cavosteliida Cavosteliaceae Planoprotostelium Planoprotostelium fungivorum
21594844 21594844 PRJNA716463_P_NODE_110837_length_242_cov_1.822485_g110419_i0 PRJNA716463 110837 242 1.822485 4.4104137 Eumycetozoa 142796 Evosea other_Eukaryota 123 4.05e-31   NR KAF2076175.1 133409 g110419 i0 70 1.98347107438017 80 24 99.2 0 241 2 115 194 KAF2076175.1 hypothetical protein CYY_002528 [Polysphondylium violaceum] diamond 480 123 1 Eukaryota Amoebozoa   Evosea Eumycetozoa Dictyosteliales Dictyosteliaceae Polysphondylium Polysphondylium violaceum
22385793 22385793 PRJNA716463_P_NODE_66838_length_278_cov_4.921951_g66421_i0 PRJNA716463 66838 278 4.921951 13.68302378 Acytostelium subglobosum LB1 1410327 Evosea other_Eukaryota 140 1.92e-36   NR XP_012752978.1 1410327 g66421 i0 73.9 1.98561151079137 92 24 99.3 0 278 3 672 763 XP_012752978.1 hypothetical protein SAMD00019534_071170 [Acytostelium subglobosum LB1] diamond 552 140 1 Eukaryota Amoebozoa   Evosea Eumycetozoa Acytosteliales Acytosteliaceae Acytostelium Acytostelium subglobosum
23661361 23661361 PRJNA716463_P_NODE_65599_length_279_cov_3.757282_g65182_i0 PRJNA716463 65599 279 3.757282 10.48281678 Pelomyxa schiedti 1580589 Evosea other_Eukaryota 92.4 1.71e-20   NR KAH3762867.1 1580589 g65182 i0 49 1.03225806451613 96 44 97.8 2 6 278 53 148 KAH3762867.1 14-3-3 protein [Pelomyxa schiedti] diamond 288 92.4 1 Eukaryota Amoebozoa   Evosea   Pelobiontida Pelomyxidae Pelomyxa Pelomyxa schiedti
24144235 24144235 PRJNA716463_P_NODE_116719_length_234_cov_2.583851_g116301_i0 PRJNA716463 116719 234 2.583851 6.04621134 Acanthamoeba 5754 Discosea other_Eukaryota 433 6.41e-117   NTclustered gi|2044079942|gb|MZ272134.1| 5756 g116301 i0 100 100.713675213675 234 0 100 0 1 234 2316 2549 Acanthamoeba sp. isolate AcW153B small subunit ribosomal RNA gene, partial sequence blastn 23567 433 1 Eukaryota Amoebozoa   Discosea   Longamoebia Acanthamoebidae Acanthamoeba Acanthamoeba sp.
24934577 24934577 PRJNA716463_P_NODE_4840_length_473_cov_4.007500_g4435_i0 PRJNA716463 4840 473 4.0075 18.955475 Acanthamoeba castellanii 5755 Discosea other_Eukaryota 610 6.049999999999999e-170   NTclustered gi|300078498|gb|GU001160.1| 5755 g4435 i0 90.061 9.19238900634249 493 17 100 19 1 473 5418 5898 Acanthamoeba castellanii 18S ribosomal RNA gene, partial sequence; internal transcribed spacer 1, 5.8S ribosomal RNA gene, and internal transcribed spacer 2, complete sequence; and 28S ribosomal RNA gene, partial sequence blastn 4348 610 1 Eukaryota Amoebozoa   Discosea   Longamoebia Acanthamoebidae Acanthamoeba Acanthamoeba castellanii
24934745 24934745 PRJNA716463_P_NODE_59040_length_284_cov_2.540284_g58623_i0 PRJNA716463 59040 284 2.540284 7.21440656 Acanthamoeba polyphaga 5757 Discosea other_Eukaryota 279 1.1e-70   NTclustered gi|932090235|gb|KP054475.2| 5757 g58623 i0 84.561 36.443661971831 285 41 100 3 1 284 1645 1363 Acanthamoeba polyphaga strain Linc Ap-1 mitochondrion, complete genome blastn 10350 279 1 Eukaryota Amoebozoa   Discosea   Longamoebia Acanthamoebidae Acanthamoeba Acanthamoeba polyphaga
26935868 26935868 PRJNA716463_P_NODE_93682_length_257_cov_2.152174_g93265_i0 PRJNA716463 93682 257 2.152174 5.53108718 Eukaryota 2759 unresolved_Eukaryota other_Eukaryota 88.2 2.28e-18   NR AAD24195.1 5791 g93265 i0 52.9 1.98443579766537 85 40 99.2 0 257 3 236 320 AAD24195.1 fragmin A [Physarum polycephalum] diamond 510 88.2 1 Eukaryota Amoebozoa   Evosea Eumycetozoa Physariida Physaraceae Physarum Physarum polycephalum
27304976 27304976 PRJNA716463_P_NODE_49283_length_291_cov_2.087156_g48866_i0 PRJNA716463 49283 291 2.087156 6.07362396 Tieghemostelium lacteum 361077 Evosea other_Eukaryota 90.1 1.51e-18   NR KYR00721.1 361077 g48866 i0 49 0.989690721649485 96 45 99 2 2 289 1099 1190 KYR00721.1 alpha actinin [Tieghemostelium lacteum] diamond 288 90.1 1 Eukaryota Amoebozoa   Evosea Eumycetozoa Dictyosteliales Raperosteliaceae Tieghemostelium Tieghemostelium lacteum
28820168 28820168 PRJNA716463_P_NODE_62048_length_282_cov_2.200957_g61631_i0 PRJNA716463 62048 282 2.200957 6.20669874 Acanthamoeba castellanii str. Neff 1257118 Discosea other_Eukaryota 114 4.8e-28   NR XP_004341646.1 1257118 g61631 i0 57.9 3.04255319148936 95 39 100 1 282 1 202 296 XP_004341646.1 papain family cysteine protease containing protein [Acanthamoeba castellanii str. Neff] diamond 858 114 1 Eukaryota Amoebozoa   Discosea   Longamoebia Acanthamoebidae Acanthamoeba Acanthamoeba castellanii
29231140 29231140 PRJNA716463_P_NODE_33549_length_299_cov_5.053097_g33132_i0 PRJNA716463 33549 299 5.053097 15.10876003 Acytostelium subglobosum LB1 1410327 Evosea other_Eukaryota 45.1 0.0104   NR XP_012751617.1 1410327 g33132 i0 45.1 0.511705685618729 51 27 51.2 1 295 143 159 208 XP_012751617.1 hypothetical protein SAMD00019534_088060 [Acytostelium subglobosum LB1] diamond 153 45.1 1 Eukaryota Amoebozoa   Evosea Eumycetozoa Acytosteliales Acytosteliaceae Acytostelium Acytostelium subglobosum
29294090 29294090 PRJNA716463_P_NODE_100509_length_251_cov_0.865169_g100092_i0 PRJNA716463 100509 251 0.865169 2.17157419 Planoprotostelium fungivorum 1890364 Evosea other_Eukaryota 92.4 1.34e-19   NR PRP85070.1 1890364 g100092 i0 55.4 0.884462151394422 74 32 88.4 1 28 249 590 662 PRP85070.1 hypothetical protein PROFUN_07254 [Planoprotostelium fungivorum] diamond 222 92.4 1 Eukaryota Amoebozoa   Evosea Variosea Cavosteliida Cavosteliaceae Planoprotostelium Planoprotostelium fungivorum
29609529 29609529 PRJNA716463_P_NODE_92710_length_258_cov_1.664865_g92293_i0 PRJNA716463 92710 258 1.664865 4.2953517 Dictyostelium discoideum AX4 352472 Evosea other_Eukaryota 74.3 1.34e-13   NR XP_001733013.1 352472 g92293 i0 44.8 1.84883720930233 87 47 100 1 1 258 88 174 XP_001733013.1 calcium-binding EF-hand domain-containing protein [Dictyostelium discoideum AX4] diamond 477 74.3 1 Eukaryota Amoebozoa   Evosea Eumycetozoa Dictyosteliales Dictyosteliaceae Dictyostelium Dictyostelium discoideum
29894190 29894190 PRJNA716463_P_NODE_105711_length_246_cov_3.265896_g105293_i0 PRJNA716463 105711 246 3.265896 8.03410416 Planoprotostelium fungivorum 1890364 Evosea other_Eukaryota 57.8 2.04e-7   NR PRP83859.1 1890364 g105293 i0 42.6 1.65853658536585 68 31 82.9 3 13 216 1252 1311 PRP83859.1 hypothetical protein PROFUN_08890 [Planoprotostelium fungivorum] diamond 408 57.8 1 Eukaryota Amoebozoa   Evosea Variosea Cavosteliida Cavosteliaceae Planoprotostelium Planoprotostelium fungivorum
30336792 30336792 PRJNA716463_P_NODE_94472_length_256_cov_2.808743_g94055_i0 PRJNA716463 94472 256 2.808743 7.19038208 Dictyostelium purpureum 5786 Evosea other_Eukaryota 78.2 1.58e-15   NR XP_003291097.1 5786 g94055 i0 41 2.9296875 83 49 97.3 0 6 254 17 99 XP_003291097.1 uncharacterized protein DICPUDRAFT_38509 [Dictyostelium purpureum] diamond 750 78.2 1 Eukaryota Amoebozoa   Evosea Eumycetozoa Dictyosteliales Dictyosteliaceae Dictyostelium Dictyostelium purpureum
30968452 30968452 PRJNA716463_P_NODE_78654_length_269_cov_4.000000_g78237_i0 PRJNA716463 78654 269 4 10.76 Planoprotostelium fungivorum 1890364 Evosea other_Eukaryota 137 5.89e-36   NR PRP76506.1 1890364 g78237 i0 67.8 0.970260223048327 87 28 97 0 266 6 289 375 PRP76506.1 aldehyde dehydrogenase [Planoprotostelium fungivorum] diamond 261 137 1 Eukaryota Amoebozoa   Evosea Variosea Cavosteliida Cavosteliaceae Planoprotostelium Planoprotostelium fungivorum
31727010 31727010 PRJNA716463_P_NODE_49537_length_291_cov_1.821101_g49120_i0 PRJNA716463 49537 291 1.821101 5.29940391 Planoprotostelium fungivorum 1890364 Evosea other_Eukaryota 73.6 9.33e-13   NR PRP84218.1 1890364 g49120 i0 55.9 0.701030927835051 68 27 70.1 1 206 3 26 90 PRP84218.1 hypothetical protein PROFUN_08418 [Planoprotostelium fungivorum] diamond 204 73.6 1 Eukaryota Amoebozoa   Evosea Variosea Cavosteliida Cavosteliaceae Planoprotostelium Planoprotostelium fungivorum
31758752 31758752 PRJNA716463_P_NODE_99677_length_251_cov_3.129213_g99260_i0 PRJNA716463 99677 251 3.129213 7.85432463 Planoprotostelium fungivorum 1890364 Evosea other_Eukaryota 97.1 6.680000000000001e-22   NR PRP76458.1 1890364 g99260 i0 55.4 2.00796812749004 83 36 99.2 1 251 3 53 134 PRP76458.1 vacuolar protein sorting-associated protein 26 [Planoprotostelium fungivorum] diamond 504 97.1 1 Eukaryota Amoebozoa   Evosea Variosea Cavosteliida Cavosteliaceae Planoprotostelium Planoprotostelium fungivorum
31885216 31885216 PRJNA716463_P_NODE_96877_length_254_cov_2.160221_g96460_i0 PRJNA716463 96877 254 2.160221 5.48696134 Planoprotostelium fungivorum 1890364 Evosea other_Eukaryota 84.7 7.24e-17   NR PRP88434.1 1890364 g96460 i0 58.2 1.86614173228346 79 33 93.3 0 247 11 341 419 PRP88434.1 hypothetical protein PROFUN_03151 [Planoprotostelium fungivorum] diamond 474 84.7 1 Eukaryota Amoebozoa   Evosea Variosea Cavosteliida Cavosteliaceae Planoprotostelium Planoprotostelium fungivorum

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;