RNAquarium Metadata Server
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contig_metadata

2 rows where bioproject = "PRJNA715462", tax_phylum = "Candidatus Bathyarchaeota" and tax_superkingdom = "Archaea"

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tax_superkingdom 1

  • Archaea · 2 ✖

tax_phylum 1

  • Candidatus Bathyarchaeota · 2 ✖

tax_kingdom 1

bioproject 1

  • PRJNA715462 · 2 ✖

analysis 1

tax_clade 0

Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
27904550 27904550 PRJNA715462_P_NODE_58705_length_247_cov_0.885057_g57909_i0 PRJNA715462 58705 247 0.885057 2.18609079 Candidatus Bathyarchaeota archaeon 2026714 Archaea Archaea 44.7 0.00802   NR PMB74956.1 2026714 g57909 i0 36.1 2.74493927125506 72 43 87.4 1 9 224 484 552 PMB74956.1 MAG: elongation factor EF-2 [Candidatus Bathyarchaeota archaeon] diamond 678 44.7 1 Archaea   Thermoproteati Candidatus Bathyarchaeota         Candidatus Bathyarchaeota archaeon
27999721 27999721 PRJNA715462_P_NODE_54765_length_249_cov_0.875000_g53969_i0 PRJNA715462 54765 249 0.875 2.17875 Candidatus Bathyarchaeia archaeon 3045160 Archaea Archaea 55.1 8.55e-7   NR HSQ54041.1 3045160 g53969 i0 76.5 0.409638554216867 34 8 41 0 1 102 52 85 HSQ54041.1 tetratricopeptide repeat protein [Candidatus Bathyarchaeia archaeon] diamond 102 55.1 1 Archaea   Thermoproteati Candidatus Bathyarchaeota Candidatus Bathyarchaeia       Candidatus Bathyarchaeia archaeon

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;