RNAquarium Metadata Server
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contig_metadata

2 rows where bioproject = "PRJNA715462", tax_phylum = "Armatimonadota" and tax_superkingdom = "Bacteria"

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tax_superkingdom 1

  • Bacteria · 2 ✖

tax_phylum 1

  • Armatimonadota · 2 ✖

tax_kingdom 1

bioproject 1

  • PRJNA715462 · 2 ✖

analysis 1

tax_clade 0

Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
27494390 27494390 PRJNA715462_P_NODE_66183_length_242_cov_2.106509_g65387_i0 PRJNA715462 66183 242 2.106509 5.09775178 Armatimonadota bacterium 2033014 Bacteria Bacteria 50.8 1.06e-5   NR MBL1149869.1 2033014 g65387 i0 40.4 1.1900826446281 52 31 64.5 0 172 17 5 56 MBL1149869.1 hypothetical protein [Armatimonadota bacterium] diamond 288 50.8 1 Bacteria   Bacillati Armatimonadota         Armatimonadota bacterium
31663671 31663671 PRJNA715462_P_NODE_63797_length_244_cov_0.900585_g63001_i0 PRJNA715462 63797 244 0.900585 2.1974274 Fimbriimonadales bacterium 2682145 Bacteria Bacteria 42.4 0.0494   NR MFN8139915.1 2682145 g63001 i0 38.7 0.762295081967213 62 31 75 2 244 62 97 152 MFN8139915.1 iron ABC transporter permease [Fimbriimonadales bacterium] diamond 186 42.4 1 Bacteria   Bacillati Armatimonadota Fimbriimonadia Fimbriimonadales     Fimbriimonadales bacterium

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;