contig_metadata
10 rows where bioproject = "PRJNA715462" and tax_kingdom = "Thermoproteati"
This data as json, CSV (advanced)
| Link | rowid ▼ | query | bioproject | node | length | coverage | rel_abundance | taxname_lca | taxid_lca | taxoncategory | taxoncategorysimple | bits | evalue | lowcoverage_flag | analysis_used | target | taxid | gene | allele | pident | sumperc_cov | alnlen | mismatch | qcov | gapopen | qstart | qend | tstart | tend | target_title | analysis | sumalnlen | maxbits | bits_percmax | tax_superkingdom | tax_clade | tax_kingdom | tax_phylum | tax_class | tax_order | tax_family | tax_genus | tax_species |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 18558322 | 18558322 | PRJNA715462_P_NODE_68495_length_241_cov_0.916667_g67699_i0 | PRJNA715462 | 68495 | 241 | 0.916667 | 2.20916747 | Candidatus Nitrososphaera evergladensis | 1459637 | Archaea | Archaea | 206 | 1.57e-48 | NTclustered | gi|665992324|gb|CP007174.1| | 1459636 | g67699 | i0 | 82.158 | 4 | 241 | 41 | 99 | 2 | 2 | 241 | 1519047 | 1518808 | Candidatus Nitrososphaera evergladensis SR1, complete genome | blastn | 964 | 206 | 1 | Archaea | Thermoproteati | Nitrososphaerota | Nitrososphaeria | Nitrososphaerales | Nitrososphaeraceae | Nitrososphaera | Candidatus Nitrososphaera evergladensis | ||
| 21108079 | 21108079 | PRJNA715462_P_NODE_26797_length_347_cov_1.124088_g26001_i0 | PRJNA715462 | 26797 | 347 | 1.124088 | 3.90058536 | Nitrosarchaeum sp. | 2026886 | Archaea | Archaea | 196 | 8.66e-57 | NR | MFB5612793.1 | 2026886 | g26001 | i0 | 86.1 | 1.98847262247839 | 115 | 16 | 99.4 | 0 | 3 | 347 | 445 | 559 | MFB5612793.1 molecular chaperone DnaK [Nitrosarchaeum sp.] | diamond | 690 | 196 | 1 | Archaea | Thermoproteati | Nitrososphaerota | Nitrososphaeria | Nitrosopumilales | Nitrosopumilaceae | Nitrosarchaeum | Nitrosarchaeum sp. | ||
| 27904550 | 27904550 | PRJNA715462_P_NODE_58705_length_247_cov_0.885057_g57909_i0 | PRJNA715462 | 58705 | 247 | 0.885057 | 2.18609079 | Candidatus Bathyarchaeota archaeon | 2026714 | Archaea | Archaea | 44.7 | 0.00802 | NR | PMB74956.1 | 2026714 | g57909 | i0 | 36.1 | 2.74493927125506 | 72 | 43 | 87.4 | 1 | 9 | 224 | 484 | 552 | PMB74956.1 MAG: elongation factor EF-2 [Candidatus Bathyarchaeota archaeon] | diamond | 678 | 44.7 | 1 | Archaea | Thermoproteati | Candidatus Bathyarchaeota | Candidatus Bathyarchaeota archaeon | ||||||
| 27904556 | 27904556 | PRJNA715462_P_NODE_63905_length_244_cov_0.900585_g63109_i0 | PRJNA715462 | 63905 | 244 | 0.900585 | 2.1974274 | Nitrososphaeraceae archaeon | 2169593 | Archaea | Archaea | 162 | 1.78e-46 | NR | HZB73908.1 | 2169593 | g63109 | i0 | 93.8 | 0.983606557377049 | 80 | 5 | 98.4 | 0 | 3 | 242 | 78 | 157 | HZB73908.1 DUF3179 domain-containing protein [Nitrososphaeraceae archaeon] | diamond | 240 | 162 | 1 | Archaea | Thermoproteati | Nitrososphaerota | Nitrososphaeria | Nitrososphaerales | Nitrososphaeraceae | Nitrososphaeraceae archaeon | |||
| 27999721 | 27999721 | PRJNA715462_P_NODE_54765_length_249_cov_0.875000_g53969_i0 | PRJNA715462 | 54765 | 249 | 0.875 | 2.17875 | Candidatus Bathyarchaeia archaeon | 3045160 | Archaea | Archaea | 55.1 | 8.55e-7 | NR | HSQ54041.1 | 3045160 | g53969 | i0 | 76.5 | 0.409638554216867 | 34 | 8 | 41 | 0 | 1 | 102 | 52 | 85 | HSQ54041.1 tetratricopeptide repeat protein [Candidatus Bathyarchaeia archaeon] | diamond | 102 | 55.1 | 1 | Archaea | Thermoproteati | Candidatus Bathyarchaeota | Candidatus Bathyarchaeia | Candidatus Bathyarchaeia archaeon | |||||
| 28610011 | 28610011 | PRJNA715462_P_NODE_54827_length_249_cov_0.875000_g54031_i0 | PRJNA715462 | 54827 | 249 | 0.875 | 2.17875 | root | 1 | Root_unresolved | Root_unresolved | 98.2 | 5.18e-24 | NR | MCE4628138.1 | 2480821 | g54031 | i0 | 53 | 5 | 83 | 39 | 100 | 0 | 249 | 1 | 18 | 100 | MCE4628138.1 nucleoside-diphosphate kinase [Desulfurococcales archaeon] | diamond | 1245 | 98.6 | 0.995943204868154 | Archaea | Thermoproteati | Thermoproteota | Thermoprotei | Desulfurococcales | Desulfurococcales archaeon | ||||
| 28946996 | 28946996 | PRJNA715462_P_NODE_52268_length_250_cov_0.870056_g51472_i0 | PRJNA715462 | 52268 | 250 | 0.870056 | 2.17514 | Nitrososphaeraceae archaeon | 2169593 | Archaea | Archaea | 54.3 | 3.4e-6 | NR | MDW0181425.1 | 2169593 | g51472 | i0 | 40.9 | 3.192 | 66 | 39 | 79.2 | 0 | 3 | 200 | 665 | 730 | MDW0181425.1 reverse transcriptase domain-containing protein [Nitrososphaeraceae archaeon] | diamond | 798 | 54.3 | 1 | Archaea | Thermoproteati | Nitrososphaerota | Nitrososphaeria | Nitrososphaerales | Nitrososphaeraceae | Nitrososphaeraceae archaeon | |||
| 31063233 | 31063233 | PRJNA715462_P_NODE_70195_length_231_cov_2.075949_g69399_i0 | PRJNA715462 | 70195 | 231 | 2.075949 | 4.79544219 | Nitrososphaerota archaeon | 2026795 | Archaea | Archaea | 58.2 | 9.5e-8 | NR | RZD32614.1 | 2026795 | g69399 | i0 | 43.6 | 0.714285714285714 | 55 | 31 | 71.4 | 0 | 63 | 227 | 66 | 120 | RZD32614.1 MAG: hypothetical protein CXT79_05995 [Nitrososphaerota archaeon] | diamond | 165 | 58.2 | 1 | Archaea | Thermoproteati | Nitrososphaerota | Nitrososphaerota archaeon | ||||||
| 31189037 | 31189037 | PRJNA715462_P_NODE_56975_length_248_cov_0.880000_g56179_i0 | PRJNA715462 | 56975 | 248 | 0.88 | 2.1824 | Nitrosarchaeum sp. | 2026886 | Archaea | Archaea | 112 | 1.57e-26 | NR | MFB5612793.1 | 2026886 | g56179 | i0 | 69.5 | 0.991935483870968 | 82 | 25 | 99.2 | 0 | 3 | 248 | 512 | 593 | MFB5612793.1 molecular chaperone DnaK [Nitrosarchaeum sp.] | diamond | 246 | 112 | 1 | Archaea | Thermoproteati | Nitrososphaerota | Nitrososphaeria | Nitrosopumilales | Nitrosopumilaceae | Nitrosarchaeum | Nitrosarchaeum sp. | ||
| 31442383 | 31442383 | PRJNA715462_P_NODE_44336_length_268_cov_1.343590_g43540_i0 | PRJNA715462 | 44336 | 268 | 1.34359 | 3.6008212 | Nitrososphaeraceae archaeon | 2169593 | Archaea | Archaea | 50.4 | 9.64e-5 | NR | MDW0252355.1 | 2169593 | g43540 | i0 | 38.8 | 0.548507462686567 | 49 | 30 | 54.9 | 0 | 159 | 13 | 457 | 505 | MDW0252355.1 reverse transcriptase family protein [Nitrososphaeraceae archaeon] | diamond | 147 | 50.4 | 1 | Archaea | Thermoproteati | Nitrososphaerota | Nitrososphaeria | Nitrososphaerales | Nitrososphaeraceae | Nitrososphaeraceae archaeon |
Advanced export
JSON shape: default, array, newline-delimited
CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;