contig_metadata
10 rows where bioproject = "PRJNA715462", tax_kingdom = "Pseudomonadati" and tax_phylum = "Bdellovibrionota"
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| Link | rowid ▼ | query | bioproject | node | length | coverage | rel_abundance | taxname_lca | taxid_lca | taxoncategory | taxoncategorysimple | bits | evalue | lowcoverage_flag | analysis_used | target | taxid | gene | allele | pident | sumperc_cov | alnlen | mismatch | qcov | gapopen | qstart | qend | tstart | tend | target_title | analysis | sumalnlen | maxbits | bits_percmax | tax_superkingdom | tax_clade | tax_kingdom | tax_phylum | tax_class | tax_order | tax_family | tax_genus | tax_species |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 5809292 | 5809292 | PRJNA715462_P_NODE_26185_length_352_cov_0.824373_g25389_i0 | PRJNA715462 | 26185 | 352 | 0.824373 | 2.90179296 | Bdellovibrionales bacterium | 2053517 | Bacteria | Bacteria | 52.8 | 0.033 | NTclustered | gi|2626289182|emb|OY843585.1| | 2053517 | g25389 | i0 | 100 | 0.0795454545454545 | 28 | 0 | 8 | 0 | 40 | 67 | 298368 | 298341 | MAG: Bdellovibrionales bacterium isolate 022bb5af-5c53-4953-82b0-2ef8059d9f16 genome assembly, chromosome: 1 | blastn | 28 | 52.8 | 1 | Bacteria | Pseudomonadati | Bdellovibrionota | Bdellovibrionia | Bdellovibrionales | Bdellovibrionales bacterium | ||||
| 19044006 | 19044006 | PRJNA715462_P_NODE_29715_length_327_cov_2.421260_g28919_i0 | PRJNA715462 | 29715 | 327 | 2.42126 | 7.9175202 | Peredibacter | 263370 | Bacteria | Bacteria | 544 | 4.16e-150 | NTclustered | gi|2631252187|gb|CP139487.1| | 28202 | g28919 | i0 | 96.646 | 211.079510703364 | 328 | 10 | 100 | 1 | 1 | 327 | 511251 | 511578 | Peredibacter starrii strain A3.12 chromosome, complete genome | blastn | 69023 | 549 | 0.990892531876138 | Bacteria | Pseudomonadati | Bdellovibrionota | Bacteriovoracia | Bacteriovoracales | Bacteriovoracaceae | Peredibacter | Peredibacter starrii | ||
| 19833198 | 19833198 | PRJNA715462_P_NODE_57296_length_247_cov_1.770115_g56500_i0 | PRJNA715462 | 57296 | 247 | 1.770115 | 4.37218405 | Bdellovibrio sp. HCB117 | 3394359 | Bacteria | Bacteria | 198 | 2.71e-46 | NTclustered | gi|2895987660|gb|CP178622.1| | 3394359 | g56500 | i0 | 81.481 | 1.73279352226721 | 243 | 43 | 98 | 2 | 6 | 247 | 2734488 | 2734729 | Bdellovibrio sp. HCB117 chromosome, complete genome | blastn | 428 | 198 | 1 | Bacteria | Pseudomonadati | Bdellovibrionota | Bdellovibrionia | Bdellovibrionales | Pseudobdellovibrionaceae | Bdellovibrio | Bdellovibrio sp. HCB117 | ||
| 26862422 | 26862422 | PRJNA715462_P_NODE_35001_length_299_cov_0.840708_g34205_i0 | PRJNA715462 | 35001 | 299 | 0.840708 | 2.51371692 | Pseudobdellovibrionaceae bacterium | 2026715 | Bacteria | Bacteria | 44.3 | 0.0197 | NR | MBN22457.1 | 2026715 | g34205 | i0 | 37.7 | 0.531772575250836 | 53 | 33 | 53.2 | 0 | 108 | 266 | 335 | 387 | MBN22457.1 AAA family ATPase [Pseudobdellovibrionaceae bacterium] | diamond | 159 | 44.3 | 1 | Bacteria | Pseudomonadati | Bdellovibrionota | Bdellovibrionia | Bdellovibrionales | Pseudobdellovibrionaceae | Pseudobdellovibrionaceae bacterium | |||
| 27567927 | 27567927 | PRJNA715462_P_NODE_56184_length_248_cov_0.880000_g55388_i0 | PRJNA715462 | 56184 | 248 | 0.88 | 2.1824 | Pseudomonadati | 3379134 | Bacteria | Bacteria | 53.1 | 8.49e-6 | NR | MBO9666903.1 | 28201 | g55388 | i0 | 42 | 11.4314516129032 | 81 | 44 | 98 | 3 | 248 | 6 | 373 | 450 | MBO9666903.1 S9 family peptidase [Bdellovibrio sp.] | diamond | 2835 | 53.5 | 0.992523364485981 | Bacteria | Pseudomonadati | Bdellovibrionota | Bdellovibrionia | Bdellovibrionales | Pseudobdellovibrionaceae | Bdellovibrio | Bdellovibrio sp. | ||
| 27873193 | 27873193 | PRJNA715462_P_NODE_62445_length_245_cov_0.895349_g61649_i0 | PRJNA715462 | 62445 | 245 | 0.895349 | 2.19360505 | Pseudobdellovibrio exovorus | 453816 | Bacteria | Bacteria | 43.1 | 0.0221 | NR | WP_015470185.1 | 453816 | g61649 | i0 | 40 | 0.73469387755102 | 60 | 36 | 73.5 | 0 | 1 | 180 | 146 | 205 | WP_015470185.1 HdeD family acid-resistance protein [Pseudobdellovibrio exovorus] | diamond | 180 | 43.1 | 1 | Bacteria | Pseudomonadati | Bdellovibrionota | Bdellovibrionia | Bdellovibrionales | Pseudobdellovibrionaceae | Pseudobdellovibrio | Pseudobdellovibrio exovorus | ||
| 29514868 | 29514868 | PRJNA715462_P_NODE_46070_length_263_cov_1.247368_g45274_i0 | PRJNA715462 | 46070 | 263 | 1.247368 | 3.28057784 | Oligoflexia bacterium | 2599941 | Bacteria | Bacteria | 63.5 | 8.93e-10 | NR | MDR3605782.1 | 2599941 | g45274 | i0 | 42.5 | 0.992395437262357 | 87 | 38 | 99.2 | 1 | 262 | 2 | 124 | 198 | MDR3605782.1 SEC59/DGK1/VTE5 family protein [Oligoflexia bacterium] | diamond | 261 | 63.5 | 1 | Bacteria | Pseudomonadati | Bdellovibrionota | Oligoflexia | Oligoflexia bacterium | |||||
| 29862393 | 29862393 | PRJNA715462_P_NODE_56871_length_248_cov_0.880000_g56075_i0 | PRJNA715462 | 56871 | 248 | 0.88 | 2.1824 | Bdellovibrio bacteriovorus | 959 | Bacteria | Bacteria | 63.2 | 6.17e-10 | NR | WP_374080345.1 | 959 | g56075 | i0 | 44.2 | 0.931451612903226 | 77 | 41 | 91.9 | 2 | 246 | 19 | 79 | 154 | WP_374080345.1 HEAT repeat domain-containing protein [Bdellovibrio bacteriovorus] | diamond | 231 | 63.2 | 1 | Bacteria | Pseudomonadati | Bdellovibrionota | Bdellovibrionia | Bdellovibrionales | Pseudobdellovibrionaceae | Bdellovibrio | Bdellovibrio bacteriovorus | ||
| 31769171 | 31769171 | PRJNA715462_P_NODE_26237_length_351_cov_1.589928_g25441_i0 | PRJNA715462 | 26237 | 351 | 1.589928 | 5.58064728 | root | 1 | Root_unresolved | Root_unresolved | 163 | 3.58e-46 | NR | MBC7743086.1 | 28201 | g25441 | i0 | 75 | 9 | 108 | 27 | 92.3 | 0 | 1 | 324 | 282 | 389 | MBC7743086.1 cystathionine gamma-synthase [Bdellovibrio sp.] | diamond | 3159 | 164 | 0.99390243902439 | Bacteria | Pseudomonadati | Bdellovibrionota | Bdellovibrionia | Bdellovibrionales | Pseudobdellovibrionaceae | Bdellovibrio | Bdellovibrio sp. | ||
| 32454979 | 32454979 | PRJNA715462_P_NODE_35579_length_296_cov_1.031390_g34783_i0 | PRJNA715462 | 35579 | 296 | 1.03139 | 3.0529144 | Bdellovibrionales bacterium | 2053517 | Bacteria | Bacteria | 46.6 | 0.0021 | NR | NQY99292.1 | 2053517 | g34783 | i0 | 47.6 | 1.86486486486486 | 42 | 22 | 42.6 | 0 | 244 | 119 | 162 | 203 | NQY99292.1 50S ribosomal protein L4 [Bdellovibrionales bacterium] | diamond | 552 | 46.6 | 1 | Bacteria | Pseudomonadati | Bdellovibrionota | Bdellovibrionia | Bdellovibrionales | Bdellovibrionales bacterium |
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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;