RNAquarium Metadata Server
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contig_metadata

3 rows where bioproject = "PRJNA715462", tax_kingdom = "Methanobacteriati" and tax_phylum = "Thermoplasmatota"

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tax_superkingdom 1

tax_phylum 1

  • Thermoplasmatota · 3 ✖

tax_kingdom 1

  • Methanobacteriati · 3 ✖

bioproject 1

  • PRJNA715462 · 3 ✖

analysis 1

tax_clade 0

Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
30557227 30557227 PRJNA715462_P_NODE_27793_length_340_cov_1.408240_g26997_i0 PRJNA715462 27793 340 1.40824 4.788016 Thermoplasmata archaeon 1906666 Archaea Archaea 135 3.65e-35   NR RLF48920.1 1906666 g26997 i0 53.6 3.96176470588235 112 52 98.8 0 337 2 35 146 RLF48920.1 MAG: ATPase [Thermoplasmata archaeon] diamond 1347 135 1 Archaea   Methanobacteriati Thermoplasmatota Thermoplasmata       Thermoplasmata archaeon
31220705 31220705 PRJNA715462_P_NODE_52615_length_250_cov_0.870056_g51819_i0 PRJNA715462 52615 250 0.870056 2.17514 Candidatus Poseidoniales archaeon 2163009 Archaea Archaea 43.1 0.0163   NR DAC37011.1 2163009 g51819 i0 42.4 0.708 59 30 69.6 2 190 17 10 65 DAC37011.1 MAG TPA: hypothetical protein D7H96_02545, partial [Candidatus Poseidoniales archaeon] diamond 177 43.1 1 Archaea   Methanobacteriati Thermoplasmatota Candidatus Poseidoniia Candidatus Poseidoniales     Candidatus Poseidoniales archaeon
31358176 31358176 PRJNA715462_P_NODE_49536_length_253_cov_1.705556_g48740_i0 PRJNA715462 49536 253 1.705556 4.31505668 root 1 Root_unresolved Root_unresolved 75.9 8.4e-14   NR MCK5309982.1 1906666 g48740 i0 67.3 2.69169960474308 49 16 58.1 0 147 1 3 51 MCK5309982.1 hypothetical protein [Thermoplasmata archaeon] diamond 681 75.9 1 Archaea   Methanobacteriati Thermoplasmatota Thermoplasmata       Thermoplasmata archaeon

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;