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contig_metadata

16 rows where bioproject = "PRJNA715462" and tax_kingdom = "Methanobacteriati"

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analysis 2

tax_superkingdom 1

tax_kingdom 1

  • Methanobacteriati · 16 ✖

bioproject 1

  • PRJNA715462 · 16 ✖
Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
1982090 1982090 PRJNA715462_P_NODE_47002_length_260_cov_1.647059_g46206_i0 PRJNA715462 47002 260 1.647059 4.2823534 Halosimplex aquaticum 3026162 Archaea Archaea 52.8 0.024   NTclustered gi|2446562039|gb|CP118159.1| 3026162 g46206 i0 100 0.107692307692308 28 0 11 0 85 112 97193 97220 Halosimplex aquaticum strain XZYJT29 plasmid unnamed1, complete sequence blastn 28 52.8 1 Archaea Stenosarchaea group Methanobacteriati Methanobacteriota Halobacteria Halobacteriales Haloarculaceae Halosimplex Halosimplex aquaticum
4534580 4534580 PRJNA715462_P_NODE_53784_length_249_cov_1.488636_g52988_i0 PRJNA715462 53784 249 1.488636 3.70670364 Methanobrevibacter sp. AbM4 224719 Archaea Archaea 54.7 0.006   NTclustered gi|509083678|gb|CP004050.1| 224719 g52988 i0 100 0.116465863453815 29 0 12 0 78 106 1653229 1653201 Methanobrevibacter sp. AbM4, complete genome blastn 29 54.7 1 Archaea Methanomada group Methanobacteriati Methanobacteriota Methanobacteria Methanobacteriales Methanobacteriaceae Methanobrevibacter Methanobrevibacter sp. AbM4
4534595 4534595 PRJNA715462_P_NODE_54804_length_249_cov_0.875000_g54008_i0 PRJNA715462 54804 249 0.875 2.17875 Methanobacterium paludis 868131 Archaea Archaea 52.8 0.023   NTclustered gi|333824386|gb|CP002772.1| 868131 g54008 i0 96.774 0.124497991967871 31 1 12 0 70 100 1720585 1720615 Methanobacterium paludis strain SWAN1, complete genome blastn 31 52.8 1 Archaea Methanomada group Methanobacteriati Methanobacteriota Methanobacteria Methanobacteriales Methanobacteriaceae Methanobacterium Methanobacterium paludis
8359732 8359732 PRJNA715462_P_NODE_66547_length_242_cov_0.911243_g65751_i0 PRJNA715462 66547 242 0.911243 2.20520806 Haloferax volcanii 2246 Archaea Archaea 442 1.1099999999999995e-119   NTclustered gi|291370026|gb|CP001956.1| 309800 g65751 i0 99.587 15.603305785124 242 1 100 0 1 242 1516369 1516128 Haloferax volcanii DS2, complete sequence blastn 3776 442 1 Archaea Stenosarchaea group Methanobacteriati Methanobacteriota Halobacteria Halobacteriales Haloferacaceae Haloferax Haloferax volcanii
21107896 21107896 PRJNA715462_P_NODE_19877_length_416_cov_1.667638_g19081_i0 PRJNA715462 19877 416 1.667638 6.93737408 Methanobacteriati 3366610 Archaea Archaea 57.8 1.42e-6   NR MAS63026.1 2026739 g19081 i0 36.8 1.76682692307692 68 39 49 1 319 116 557 620 MAS63026.1 hypothetical protein [Methanobacteriota archaeon] diamond 735 57.8 1 Archaea   Methanobacteriati Methanobacteriota         Methanobacteriota archaeon
26671747 26671747 PRJNA715462_P_NODE_42041_length_275_cov_0.965347_g41245_i0 PRJNA715462 42041 275 0.965347 2.65470425 Methanobacteriota archaeon 2026739 Archaea Archaea 89.4 2.27e-18   NR RMF91081.1 2026739 g41245 i0 47.8 2.00727272727273 92 45 99.3 2 273 1 466 555 RMF91081.1 MAG: calcium-transporting P-type ATPase, PMR1-type [Methanobacteriota archaeon] diamond 552 89.4 1 Archaea   Methanobacteriati Methanobacteriota         Methanobacteriota archaeon
26893934 26893934 PRJNA715462_P_NODE_62341_length_245_cov_0.895349_g61545_i0 PRJNA715462 62341 245 0.895349 2.19360505 Methanothrix harundinacea 301375 Archaea Archaea 42.4 0.021   NR KUK44038.1 301375 g61545 i0 55.6 0.330612244897959 27 12 33.1 0 87 7 8 34 KUK44038.1 MAG: Uncharacterized protein XD72_1617 [Methanothrix harundinacea] diamond 81 42.4 1 Archaea Stenosarchaea group Methanobacteriati Methanobacteriota Methanomicrobia Methanotrichales Methanotrichaceae Methanothrix Methanothrix harundinacea
28125836 28125836 PRJNA715462_P_NODE_22765_length_382_cov_0.996764_g21969_i0 PRJNA715462 22765 382 0.996764 3.80763848 Methanobacteriota archaeon 2026739 Archaea Archaea 111 1.04e-26   NR MCH7659467.1 2026739 g21969 i0 45.7 5.01047120418848 127 67 99.7 2 381 1 124 248 MCH7659467.1 alpha/beta hydrolase [Methanobacteriota archaeon] diamond 1914 111 1 Archaea   Methanobacteriati Methanobacteriota         Methanobacteriota archaeon
29020741 29020741 PRJNA715462_P_NODE_67728_length_242_cov_0.911243_g66932_i0 PRJNA715462 67728 242 0.911243 2.20520806 root 1 Root_unresolved Root_unresolved 166 2e-45   NR WP_011248956.1 311400 g66932 i0 100 6.94214876033058 80 0 99.2 0 3 242 1589 1668 WP_011248956.1 DNA polymerase [Thermococcus kodakarensis] diamond 1680 166 1 Archaea   Methanobacteriati Methanobacteriota Thermococci Thermococcales Thermococcaceae Thermococcus Thermococcus kodakarensis
29115245 29115245 PRJNA715462_P_NODE_32048_length_314_cov_1.278008_g31252_i0 PRJNA715462 32048 314 1.278008 4.01294512 root 1 Root_unresolved Root_unresolved 220 2.3100000000000002e-65   NR 4AHC_A 2261 g31252 i0 100 1.98726114649682 104 0 99.4 0 313 2 425 528 4AHC_A Chain A, DNA POLYMERASE [Pyrococcus furiosus] diamond 624 220 1 Archaea   Methanobacteriati Methanobacteriota Thermococci Thermococcales Thermococcaceae Pyrococcus Pyrococcus furiosus
29272816 29272816 PRJNA715462_P_NODE_17789_length_448_cov_1.525333_g16993_i0 PRJNA715462 17789 448 1.525333 6.83349184 root 1 Root_unresolved Root_unresolved 54.7 2.34e-5   NR WP_292800363.1 66852 g16993 i0 27.5 1.99553571428571 149 81 99.1 6 4 447 894 1016 WP_292800363.1 hypothetical protein [Methanobrevibacter sp.] diamond 894 54.7 1 Archaea Methanomada group Methanobacteriati Methanobacteriota Methanobacteria Methanobacteriales Methanobacteriaceae Methanobrevibacter Methanobrevibacter sp.
29388910 29388910 PRJNA715462_P_NODE_40569_length_279_cov_1.495146_g39773_i0 PRJNA715462 40569 279 1.495146 4.17145734 Methanosarcinales archaeon 2250255 Archaea Archaea 103 2.6199999999999998e-23   NR RYE85578.1 2250255 g39773 i0 60.9 0.989247311827957 92 33 96.8 2 9 278 120 210 RYE85578.1 MAG: hypothetical protein EOO65_00010 [Methanosarcinales archaeon] diamond 276 103 1 Archaea Stenosarchaea group Methanobacteriati Methanobacteriota Methanomicrobia Methanosarcinales     Methanosarcinales archaeon
30083341 30083341 PRJNA715462_P_NODE_1212_length_2407_cov_10.921594_g1001_i0 PRJNA715462 1212 2407 10.921594 262.88276758 Methanobacteriota archaeon 2026739 Archaea Archaea 52 0.015   NR MCX6666597.1 2026739 g1001 i0 45.6 0.0847528043207312 68 29 7.9 2 1527 1339 9 73 MCX6666597.1 FG-GAP-like repeat-containing protein [Methanobacteriota archaeon] diamond 204 52 1 Archaea   Methanobacteriati Methanobacteriota         Methanobacteriota archaeon
30557227 30557227 PRJNA715462_P_NODE_27793_length_340_cov_1.408240_g26997_i0 PRJNA715462 27793 340 1.40824 4.788016 Thermoplasmata archaeon 1906666 Archaea Archaea 135 3.65e-35   NR RLF48920.1 1906666 g26997 i0 53.6 3.96176470588235 112 52 98.8 0 337 2 35 146 RLF48920.1 MAG: ATPase [Thermoplasmata archaeon] diamond 1347 135 1 Archaea   Methanobacteriati Thermoplasmatota Thermoplasmata       Thermoplasmata archaeon
31220705 31220705 PRJNA715462_P_NODE_52615_length_250_cov_0.870056_g51819_i0 PRJNA715462 52615 250 0.870056 2.17514 Candidatus Poseidoniales archaeon 2163009 Archaea Archaea 43.1 0.0163   NR DAC37011.1 2163009 g51819 i0 42.4 0.708 59 30 69.6 2 190 17 10 65 DAC37011.1 MAG TPA: hypothetical protein D7H96_02545, partial [Candidatus Poseidoniales archaeon] diamond 177 43.1 1 Archaea   Methanobacteriati Thermoplasmatota Candidatus Poseidoniia Candidatus Poseidoniales     Candidatus Poseidoniales archaeon
31358176 31358176 PRJNA715462_P_NODE_49536_length_253_cov_1.705556_g48740_i0 PRJNA715462 49536 253 1.705556 4.31505668 root 1 Root_unresolved Root_unresolved 75.9 8.4e-14   NR MCK5309982.1 1906666 g48740 i0 67.3 2.69169960474308 49 16 58.1 0 147 1 3 51 MCK5309982.1 hypothetical protein [Thermoplasmata archaeon] diamond 681 75.9 1 Archaea   Methanobacteriati Thermoplasmatota Thermoplasmata       Thermoplasmata archaeon

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;