RNAquarium Metadata Server
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contig_metadata

4 rows where bioproject = "PRJNA715462", tax_kingdom = "Fungi" and tax_phylum = "Cryptomycota"

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tax_superkingdom 1

tax_phylum 1

  • Cryptomycota · 4 ✖

tax_kingdom 1

  • Fungi · 4 ✖

tax_clade 1

bioproject 1

  • PRJNA715462 · 4 ✖

analysis 1

Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
9634843 9634843 PRJNA715462_P_NODE_60788_length_245_cov_2.372093_g59992_i0 PRJNA715462 60788 245 2.372093 5.81162785 Rozella allomycis CSF55 988480 Fungi Fungi 82.4 7.49e-17   NR EPZ34692.1 988480 g59992 i0 66.2 3.84489795918367 65 21 78.4 1 23 214 190 254 EPZ34692.1 Nucleic acid-binding domain-containing protein [Rozella allomycis CSF55] diamond 942 82.4 1 Eukaryota Opisthokonta Fungi Cryptomycota       Rozella Rozella allomycis
29451581 29451581 PRJNA715462_P_NODE_26430_length_349_cov_2.880435_g25634_i0 PRJNA715462 26430 349 2.880435 10.05271815 Paramicrosporidium saccamoebae 1246581 Fungi Fungi 99 4.3e-23   NR PJF16859.1 1246581 g25634 i0 47.7 0.739255014326648 86 45 73.9 0 73 330 40 125 PJF16859.1 hypothetical protein PSACC_03336 [Paramicrosporidium saccamoebae] diamond 258 99 1 Eukaryota Opisthokonta Fungi Cryptomycota       Paramicrosporidium Paramicrosporidium saccamoebae
30083352 30083352 PRJNA715462_P_NODE_32552_length_311_cov_1.294118_g31756_i0 PRJNA715462 32552 311 1.294118 4.02470698 Rozella allomycis CSF55 988480 Fungi Fungi 76.6 8.05e-15   NR EPZ35087.1 988480 g31756 i0 48.2 3.30868167202572 85 39 77.2 1 43 282 99 183 EPZ35087.1 Ran-interacting Mog1 protein domain-containing protein [Rozella allomycis CSF55] diamond 1029 76.6 1 Eukaryota Opisthokonta Fungi Cryptomycota       Rozella Rozella allomycis
31042317 31042317 PRJNA715462_P_NODE_40495_length_279_cov_2.033981_g39699_i0 PRJNA715462 40495 279 2.033981 5.67480699 Fungi 4751 Fungi Fungi 112 1.62e-28   NR EPZ36586.1 988480 g39699 i0 62.2 5.32258064516129 82 31 88.2 0 246 1 1 82 EPZ36586.1 40S ribosomal protein S3-A [Rozella allomycis CSF55] diamond 1485 112 1 Eukaryota Opisthokonta Fungi Cryptomycota       Rozella Rozella allomycis

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;