RNAquarium Metadata Server
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contig_metadata

2 rows where bioproject = "PRJNA715462", tax_kingdom = "Bacillati" and tax_phylum = "Vulcanimicrobiota"

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tax_superkingdom 1

tax_phylum 1

  • Vulcanimicrobiota · 2 ✖

tax_kingdom 1

  • Bacillati · 2 ✖

bioproject 1

  • PRJNA715462 · 2 ✖

analysis 1

tax_clade 0

Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
27114952 27114952 PRJNA715462_P_NODE_46402_length_262_cov_1.386243_g45606_i0 PRJNA715462 46402 262 1.386243 3.63195666 Candidatus Cybelea sp. 2952917 Bacteria Bacteria 65.5 2.8e-11   NR HEY2473437.1 2952917 g45606 i0 56.1 1.44274809160305 66 29 75.6 0 2 199 56 121 HEY2473437.1 putative toxin-antitoxin system toxin component, PIN family [Candidatus Cybelea sp.] diamond 378 65.5 1 Bacteria   Bacillati Vulcanimicrobiota Vulcanimicrobiia Vulcanimicrobiales Vulcanimicrobiaceae Candidatus Cybelea Candidatus Cybelea sp.
30747075 30747075 PRJNA715462_P_NODE_14194_length_523_cov_2.666667_g13399_i0 PRJNA715462 14194 523 2.666667 13.94666841 Vulcanimicrobiota bacterium 3107663 Bacteria Bacteria 202 1.6e-60   NR MFA5503840.1 3107663 g13399 i0 63.6 5.38623326959847 154 54 88.3 1 1 462 238 389 MFA5503840.1 ornithine--oxo-acid transaminase [Vulcanimicrobiota bacterium] diamond 2817 202 1 Bacteria   Bacillati Vulcanimicrobiota         Vulcanimicrobiota bacterium

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;