RNAquarium Metadata Server
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contig_metadata

2 rows where bioproject = "PRJNA715462", tax_clade = "RNA satellites" and tax_superkingdom = "Viruses"

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tax_superkingdom 1

  • Viruses · 2 ✖

tax_clade 1

  • RNA satellites · 2 ✖

bioproject 1

  • PRJNA715462 · 2 ✖

analysis 1

tax_phylum 0

tax_kingdom 0

Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
28315329 28315329 PRJNA715462_P_NODE_4346_length_1210_cov_15.648197_g3819_i0 PRJNA715462 4346 1210 15.648197 189.3431837 Green Sichuan pepper nepovirus satellite 2851655 Viruses Viruses 132 5.73e-31   NR QWY93777.1 2851655 g3819 i0 34.7 1.70578512396694 331 176 77.1 16 1073 141 55 365 QWY93777.1 hypothetical protein [Green Sichuan pepper nepovirus satellite] diamond 2064 132 1 Viruses RNA satellites             Green Sichuan pepper nepovirus satellite
31063212 31063212 PRJNA715462_P_NODE_4435_length_1193_cov_8.111607_g3904_i0 PRJNA715462 4435 1193 8.111607 96.77147151 Green Sichuan pepper nepovirus satellite 2851655 Viruses Viruses 131 9.82e-31   NR QWY93767.1 2851655 g3904 i0 31.9 2.62782900251467 357 204 85 14 1137 124 28 364 QWY93767.1 hypothetical protein [Green Sichuan pepper nepovirus satellite] diamond 3135 131 1 Viruses RNA satellites             Green Sichuan pepper nepovirus satellite

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;