RNAquarium Metadata Server
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contig_metadata

2 rows where bioproject = "PRJNA715462", tax_clade = "PVC group" and tax_phylum = "Kiritimatiellota"

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tax_superkingdom 1

tax_phylum 1

  • Kiritimatiellota · 2 ✖

tax_kingdom 1

tax_clade 1

  • PVC group · 2 ✖

bioproject 1

  • PRJNA715462 · 2 ✖

analysis 1

Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
28157639 28157639 PRJNA715462_P_NODE_47425_length_259_cov_1.569892_g46629_i0 PRJNA715462 47425 259 1.569892 4.06602028 Kiritimatiellia bacterium 2212473 Bacteria Bacteria 43.9 0.0188   NR HMP74672.1 2212473 g46629 i0 37.5 2.13127413127413 48 29 54.4 1 142 2 3039 3086 HMP74672.1 S8 family serine peptidase [Kiritimatiellia bacterium] diamond 552 43.9 1 Bacteria PVC group Pseudomonadati Kiritimatiellota Kiritimatiellia       Kiritimatiellia bacterium
30431484 30431484 PRJNA715462_P_NODE_20213_length_412_cov_1.112094_g19417_i0 PRJNA715462 20213 412 1.112094 4.58182728 Kiritimatiellia bacterium 2212473 Bacteria Bacteria 116 3.5100000000000004e-27   NR MDY0148760.1 2212473 g19417 i0 52.5 3.5752427184466 122 56 88.1 2 376 14 552 672 MDY0148760.1 SdrD B-like domain-containing protein [Kiritimatiellia bacterium] diamond 1473 116 1 Bacteria PVC group Pseudomonadati Kiritimatiellota Kiritimatiellia       Kiritimatiellia bacterium

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;