RNAquarium Metadata Server
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contig_metadata

4 rows where bioproject = "PRJNA715462", tax_clade = "FCB group" and tax_phylum = "Rhodothermota"

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tax_superkingdom 1

tax_phylum 1

  • Rhodothermota · 4 ✖

tax_kingdom 1

tax_clade 1

  • FCB group · 4 ✖

bioproject 1

  • PRJNA715462 · 4 ✖

analysis 1

Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
28820080 28820080 PRJNA715462_P_NODE_39608_length_282_cov_1.382775_g38812_i0 PRJNA715462 39608 282 1.382775 3.8994255 Rhodothermales bacterium 2306054 Bacteria Bacteria 119 1e-29   NR MFT4606032.1 2306054 g38812 i0 63 0.978723404255319 92 34 97.9 0 5 280 151 242 MFT4606032.1 4-hydroxybutyrate CoA-transferase [Rhodothermales bacterium] diamond 276 119 1 Bacteria FCB group Pseudomonadati Rhodothermota Rhodothermia Rhodothermales     Rhodothermales bacterium
29073235 29073235 PRJNA715462_P_NODE_65008_length_243_cov_0.905882_g64212_i0 PRJNA715462 65008 243 0.905882 2.20129326 Rubricoccaceae bacterium 2838334 Bacteria Bacteria 70.1 2.27e-13   NR HEX9950877.1 2838334 g64212 i0 41.3 1.97530864197531 80 47 98.8 0 241 2 6 85 HEX9950877.1 rhodanese-like domain-containing protein [Rubricoccaceae bacterium] diamond 480 70.1 1 Bacteria FCB group Pseudomonadati Rhodothermota Rhodothermia Rhodothermales Rubricoccaceae   Rubricoccaceae bacterium
30725951 30725951 PRJNA715462_P_NODE_41154_length_277_cov_2.166667_g40358_i0 PRJNA715462 41154 277 2.166667 6.00166759 Bacteria 2 Bacteria Bacteria 85.9 3.62e-17   NR NND72019.1 2306054 g40358 i0 59.1 7.11552346570397 66 27 71.5 0 78 275 8 73 NND72019.1 bifunctional sulfate adenylyltransferase/adenylylsulfate kinase [Rhodothermales bacterium] diamond 1971 86.3 0.995365005793743 Bacteria FCB group Pseudomonadati Rhodothermota Rhodothermia Rhodothermales     Rhodothermales bacterium
31347634 31347634 PRJNA715462_P_NODE_52036_length_250_cov_1.548023_g51240_i0 PRJNA715462 52036 250 1.548023 3.8700575 Rhodothermaceae bacterium 2026787 Bacteria Bacteria 78.2 1.27e-14   NR MCA1802236.1 2026787 g51240 i0 48.5 2.436 66 34 79.2 0 30 227 40 105 MCA1802236.1 M20 family peptidase [Rhodothermaceae bacterium] diamond 609 78.2 1 Bacteria FCB group Pseudomonadati Rhodothermota Rhodothermia Rhodothermales Rhodothermaceae   Rhodothermaceae bacterium

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;