RNAquarium Metadata Server
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contig_metadata

3 rows where bioproject = "PRJNA715462", tax_clade = "FCB group" and tax_phylum = "Ignavibacteriota"

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tax_superkingdom 1

tax_phylum 1

  • Ignavibacteriota · 3 ✖

tax_kingdom 1

tax_clade 1

  • FCB group · 3 ✖

bioproject 1

  • PRJNA715462 · 3 ✖

analysis 1

Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
27431447 27431447 PRJNA715462_P_NODE_44123_length_269_cov_0.867347_g43327_i0 PRJNA715462 44123 269 0.867347 2.33316343 Ignavibacteria bacterium 2053306 Bacteria Bacteria 44.7 0.0102   NR MEO8665134.1 2053306 g43327 i0 37.1 0.691449814126394 62 38 68 1 48 230 305 366 MEO8665134.1 DNRLRE domain-containing protein [Ignavibacteria bacterium] diamond 186 44.7 1 Bacteria FCB group Pseudomonadati Ignavibacteriota Ignavibacteria       Ignavibacteria bacterium
29588470 29588470 PRJNA715462_P_NODE_49250_length_254_cov_1.497238_g48454_i0 PRJNA715462 49250 254 1.497238 3.80298452 Pseudomonadati 3379134 Bacteria Bacteria 59.7 1.27e-8   NR MCX8057364.1 2053306 g48454 i0 54 2.53937007874016 50 22 57.9 1 85 231 32 81 MCX8057364.1 lipocalin family protein [Ignavibacteria bacterium] diamond 645 59.7 1 Bacteria FCB group Pseudomonadati Ignavibacteriota Ignavibacteria       Ignavibacteria bacterium
32201697 32201697 PRJNA715462_P_NODE_61838_length_245_cov_0.895349_g61042_i0 PRJNA715462 61838 245 0.895349 2.19360505 Ignavibacteria bacterium 2053306 Bacteria Bacteria 83.6 1.65e-16   NR MCU7492992.1 2053306 g61042 i0 54.9 2.00816326530612 82 36 99.2 1 243 1 411 492 MCU7492992.1 choice-of-anchor A family protein [Ignavibacteria bacterium] diamond 492 83.6 1 Bacteria FCB group Pseudomonadati Ignavibacteriota Ignavibacteria       Ignavibacteria bacterium

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;