RNAquarium Metadata Server
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contig_metadata

2 rows where bioproject = "PRJNA715462", tax_clade = "Bacteria candidate phyla" and tax_phylum = "Minisyncoccota"

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tax_superkingdom 1

tax_phylum 1

  • Minisyncoccota · 2 ✖

tax_clade 1

  • Bacteria candidate phyla · 2 ✖

bioproject 1

  • PRJNA715462 · 2 ✖

analysis 1

tax_kingdom 0

Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
24931850 24931850 PRJNA715462_P_NODE_14240_length_522_cov_2.632517_g13445_i0 PRJNA715462 14240 522 2.632517 13.74173874 Minisyncoccota bacterium 2053589 Bacteria Bacteria 162 4.279999999999999e-48   NR MDR3570671.1 2053589 g13445 i0 78.5 0.614942528735632 107 22 60.9 1 366 49 1 107 MDR3570671.1 hypothetical protein [Candidatus Paceibacterota bacterium] diamond 321 162 1 Bacteria Bacteria candidate phyla   Minisyncoccota         Minisyncoccota bacterium
27778683 27778683 PRJNA715462_P_NODE_69464_length_241_cov_0.916667_g68668_i0 PRJNA715462 69464 241 0.916667 2.20916747 Minisyncoccota bacterium 2053589 Bacteria Bacteria 64.3 1.13e-10   NR MDR3571063.1 2053589 g68668 i0 63 0.672199170124481 54 20 67.2 0 213 52 97 150 MDR3571063.1 prohibitin family protein [Candidatus Paceibacterota bacterium] diamond 162 64.3 1 Bacteria Bacteria candidate phyla   Minisyncoccota         Minisyncoccota bacterium

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;