RNAquarium Metadata Server
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contig_metadata

3 rows where bioproject = "PRJNA715462", tax_clade = "Bacteria candidate phyla" and tax_phylum = "Candidatus Saccharimonadota"

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tax_superkingdom 1

tax_phylum 1

  • Candidatus Saccharimonadota · 3 ✖

tax_clade 1

  • Bacteria candidate phyla · 3 ✖

bioproject 1

  • PRJNA715462 · 3 ✖

analysis 1

tax_kingdom 0

Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
18558118 18558118 PRJNA715462_P_NODE_57875_length_247_cov_0.885057_g57079_i0 PRJNA715462 57875 247 0.885057 2.18609079 Candidatus Saccharimonadota bacterium 2026720 Bacteria Bacteria 146 1.46e-39   NR MBH1956317.1 2026720 g57079 i0 90.1 14.6477732793522 81 8 98.4 0 243 1 70 150 MBH1956317.1 DNA polymerase III subunit gamma/tau [Candidatus Saccharibacteria bacterium] diamond 3618 146 1 Bacteria Bacteria candidate phyla   Candidatus Saccharimonadota         Candidatus Saccharimonadota bacterium
27114929 27114929 PRJNA715462_P_NODE_15762_length_487_cov_0.987923_g14966_i0 PRJNA715462 15762 487 0.987923 4.81118501 Candidatus Saccharimonadota bacterium 2026720 Bacteria Bacteria 124 1.47e-31   NR MCA9346951.1 2026720 g14966 i0 38.2 1.01642710472279 165 97 99.2 2 4 486 22 185 MCA9346951.1 hypothetical protein [Candidatus Saccharibacteria bacterium] diamond 495 124 1 Bacteria Bacteria candidate phyla   Candidatus Saccharimonadota         Candidatus Saccharimonadota bacterium
28567770 28567770 PRJNA715462_P_NODE_33067_length_308_cov_1.825532_g32271_i0 PRJNA715462 33067 308 1.825532 5.62263856 Candidatus Saccharimonadales bacterium 2973664 Bacteria Bacteria 129 4.83e-33   NR HKU17713.1 2973664 g32271 i0 66.7 0.993506493506494 102 34 99.4 0 306 1 161 262 HKU17713.1 hypothetical protein [Candidatus Saccharimonadales bacterium] diamond 306 129 1 Bacteria Bacteria candidate phyla   Candidatus Saccharimonadota Candidatus Saccharimonadia Candidatus Saccharimonadales     Candidatus Saccharimonadales bacterium

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;