RNAquarium Metadata Server
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contig_metadata

2 rows where bioproject = "PRJNA715462", tax_clade = "Bacteria candidate phyla" and tax_phylum = "Candidatus Bipolaricaulota"

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tax_superkingdom 1

tax_phylum 1

  • Candidatus Bipolaricaulota · 2 ✖

tax_clade 1

  • Bacteria candidate phyla · 2 ✖

bioproject 1

  • PRJNA715462 · 2 ✖

analysis 1

tax_kingdom 0

Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
27810262 27810262 PRJNA715462_P_NODE_55924_length_248_cov_0.880000_g55128_i0 PRJNA715462 55924 248 0.88 2.1824 Candidatus Bipolaricaulota bacterium 2306012 Bacteria Bacteria 64.3 9.83e-10   NR MCS6937205.1 2306012 g55128 i0 61.9 0.508064516129032 42 16 50.8 0 13 138 298 339 MCS6937205.1 SMP-30/gluconolactonase/LRE family protein [Candidatus Bipolaricaulota bacterium] diamond 126 64.3 1 Bacteria Bacteria candidate phyla   Candidatus Bipolaricaulota         Candidatus Bipolaricaulota bacterium
29399270 29399270 PRJNA715462_P_NODE_22089_length_389_cov_1.689873_g21293_i0 PRJNA715462 22089 389 1.689873 6.57360597 Bacillati 1783272 Bacteria Bacteria 85.5 4.01e-19   NR MCD6142244.1 2306012 g21293 i0 72.5 3.74807197943445 51 14 39.3 0 10 162 16 66 MCD6142244.1 cold-shock protein [Candidatus Bipolaricaulota bacterium] diamond 1458 85.9 0.9953434225844 Bacteria Bacteria candidate phyla   Candidatus Bipolaricaulota         Candidatus Bipolaricaulota bacterium

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;