RNAquarium Metadata Server
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contig_metadata

3 rows where bioproject = "PRJNA715462", tax_clade = "Bacteria candidate phyla" and tax_phylum = "Candidatus Aminicenantota"

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tax_superkingdom 1

tax_phylum 1

  • Candidatus Aminicenantota · 3 ✖

tax_clade 1

  • Bacteria candidate phyla · 3 ✖

bioproject 1

  • PRJNA715462 · 3 ✖

analysis 1

tax_kingdom 0

Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
26830505 26830505 PRJNA715462_P_NODE_41501_length_276_cov_1.517241_g40705_i0 PRJNA715462 41501 276 1.517241 4.18758516 Candidatus Aminicenantes bacterium 2052149 Bacteria Bacteria 57 5.15e-7   NR MCK4932622.1 2052149 g40705 i0 42.1 0.619565217391304 57 33 62 0 42 212 25 81 MCK4932622.1 ankyrin repeat domain-containing protein [Candidatus Aminicenantes bacterium] diamond 171 57 1 Bacteria Bacteria candidate phyla   Candidatus Aminicenantota         Candidatus Aminicenantes bacterium
27715739 27715739 PRJNA715462_P_NODE_36364_length_292_cov_1.484018_g35568_i0 PRJNA715462 36364 292 1.484018 4.33333256 Candidatus Aminicenantes bacterium 2052149 Bacteria Bacteria 164 1.44e-48   NR MCX6574018.1 2052149 g35568 i0 79.4 0.996575342465753 97 20 99.7 0 291 1 122 218 MCX6574018.1 formate--tetrahydrofolate ligase [Candidatus Aminicenantes bacterium] diamond 291 164 1 Bacteria Bacteria candidate phyla   Candidatus Aminicenantota         Candidatus Aminicenantes bacterium
32328531 32328531 PRJNA715462_P_NODE_11539_length_608_cov_2.078505_g10756_i0 PRJNA715462 11539 608 2.078505 12.6373104 Candidatus Aminicenantes bacterium 2052149 Bacteria Bacteria 53.1 7.86e-5   NR MBN2199813.1 2052149 g10756 i0 33.3 0.384868421052632 78 52 38.5 0 265 32 74 151 MBN2199813.1 PH domain-containing protein [Candidatus Aminicenantes bacterium] diamond 234 53.1 1 Bacteria Bacteria candidate phyla   Candidatus Aminicenantota         Candidatus Aminicenantes bacterium

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;