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contig_metadata

12 rows where bioproject = "PRJNA715461", tax_clade = "Opisthokonta" and tax_phylum = "Ascomycota"

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tax_superkingdom 1

tax_phylum 1

  • Ascomycota · 12 ✖

tax_kingdom 1

tax_clade 1

  • Opisthokonta · 12 ✖

bioproject 1

  • PRJNA715461 · 12 ✖

analysis 1

Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
1192200 1192200 PRJNA715461_S_NODE_1301_length_222_cov_12644.416107_g1227_i0 PRJNA715461 1301 222 12644.416107 28070.60375754 Blumeria 34372 Fungi Fungi 267 6.46e-67   NTclustered gi|1859735560|gb|MT644878.1| 34373 g1227 i0 100 64.8603603603604 144 0 65 0 79 222 649 506 Blumeria graminis isolate DM1150 small subunit ribosomal RNA gene, partial sequence; internal transcribed spacer 1, 5.8S ribosomal RNA gene, and internal transcribed spacer 2, complete sequence; and large subunit ribosomal RNA gene, partial sequence blastn 14399 267 1 Eukaryota Opisthokonta Fungi Ascomycota Leotiomycetes Erysiphales Erysiphaceae Blumeria Blumeria graminis
5808779 5808779 PRJNA715461_S_NODE_405_length_429_cov_6585.294944_g331_i0 PRJNA715461 405 429 6585.294944 28250.91530976 Phialophora verrucosa 39412 Fungi Fungi 340 7.89e-89   NTclustered gi|336088197|dbj|AB550776.1| 39412 g331 i0 86.154 72.0745920745921 325 34 75 9 106 425 4293 3975 Phialophora verrucosa genes for ITS1, 5.8S rRNA, ITS2 and large subunit rRNA, partial and complete sequence, strain: IFM 5089 blastn 30920 340 1 Eukaryota Opisthokonta Fungi Ascomycota Eurotiomycetes Chaetothyriales Herpotrichiellaceae Phialophora Phialophora verrucosa
10120769 10120769 PRJNA715461_S_NODE_1528_length_211_cov_4.246377_g1454_i0 PRJNA715461 1528 211 4.246377 8.95985547 Eurotiomycetes 147545 Fungi Fungi 285 1.68e-72   NTclustered gi|1002923410|gb|KU561781.1| 5501 g1454 i0 91.429 98.9241706161137 210 14 99 4 1 208 215 8 Coccidioides immitis strain B11019 28S ribosomal RNA gene, partial sequence blastn 20873 285 1 Eukaryota Opisthokonta Fungi Ascomycota Eurotiomycetes Onygenales Onygenaceae Coccidioides Coccidioides immitis
11395792 11395792 PRJNA715461_S_NODE_1969_length_197_cov_10.072581_g1895_i0 PRJNA715461 1969 197 10.072581 19.84298457 Yarrowia 4951 Fungi Fungi 291 3.32e-74   NTclustered gi|2497522110|gb|OQ878644.1| 444778 g1895 i0 100 78.989847715736 157 0 80 0 38 194 203 47 Yarrowia phangngaensis isolate T378 internal transcribed spacer 1, partial sequence; 5.8S ribosomal RNA gene, complete sequence; and internal transcribed spacer 2, partial sequence blastn 15561 291 1 Eukaryota Opisthokonta Fungi Ascomycota Dipodascomycetes Dipodascales   Yarrowia Yarrowia phangngaensis
13946063 13946063 PRJNA715461_S_NODE_251_length_551_cov_7.945607_g195_i0 PRJNA715461 251 551 7.945607 43.78029457 Herpotrichiellaceae 43219 Fungi Fungi 917 0   NTclustered gi|4206352|gb|AF050276.1|AF050276 40355 g195 i0 96.898 99.0889292196007 548 15 99 2 1 548 1110 565 Fonsecaea pedrosoi 18S ribosomal RNA partial sequence, internal transcribed spacer 1, 5.8S ribosomal RNA, internal transcribed spacer 2 complete sequence and 28S ribosomal RNA partial sequence blastn 54598 922 0.994577006507592 Eukaryota Opisthokonta Fungi Ascomycota Eurotiomycetes Chaetothyriales Herpotrichiellaceae Fonsecaea Fonsecaea pedrosoi
16007725 16007725 PRJNA715461_S_NODE_633_length_331_cov_2.019380_g559_i0 PRJNA715461 633 331 2.01938 6.6841478 Polyblastidium squamulosum 2294038 Fungi Fungi 130 1.4e-25   NTclustered gi|1476663660|gb|MG257770.1| 2294038 g559 i0 83.942 40.7945619335347 137 20 41 2 24 159 8303 8438 Heterodermia squamulosa voucher 48701 18S ribosomal RNA gene, internal transcribed spacer 1, 5.8S ribosomal RNA gene, internal transcribed spacer 2, and 26S ribosomal RNA gene, complete sequence blastn 13503 130 1 Eukaryota Opisthokonta Fungi Ascomycota Lecanoromycetes Caliciales Physciaceae Polyblastidium Polyblastidium squamulosum
17769909 17769909 PRJNA715461_S_NODE_1134_length_235_cov_2.339506_g1060_i0 PRJNA715461 1134 235 2.339506 5.4978391 Blumeria 34372 Fungi Fungi 379 8.509999999999998e-101   NTclustered gi|153902086|dbj|AB273546.1| 34373 g1060 i0 99.519 82.6085106382979 208 1 89 0 4 211 548 755 Blumeria graminis genes for 18S rRNA, ITS1, 5.8S rRNA, ITS2, 28S rRNA, partial and complete sequence, isolate: MUMH1711 blastn 19413 379 1 Eukaryota Opisthokonta Fungi Ascomycota Leotiomycetes Erysiphales Erysiphaceae Blumeria Blumeria graminis
17769914 17769914 PRJNA715461_S_NODE_334_length_475_cov_128.037313_g267_i0 PRJNA715461 334 475 128.037313 608.17723675 Ascomycota 4890 Fungi Fungi 669 0   NTclustered gi|1840379205|gb|MT453271.1| 5599 g267 i0 99.726 76.8589473684211 365 1 77 0 107 471 915 551 Alternaria alternata isolate DSM100286_DF09_RLCS10 small subunit ribosomal RNA gene, partial sequence; internal transcribed spacer 1, 5.8S ribosomal RNA gene, and internal transcribed spacer 2, complete sequence; and large subunit ribosomal RNA gene, partial sequence blastn 36508 673 0.99405646359584 Eukaryota Opisthokonta Fungi Ascomycota Dothideomycetes Pleosporales Pleosporaceae Alternaria Alternaria alternata
19043978 19043978 PRJNA715461_S_NODE_1295_length_222_cov_31801.677852_g1221_i0 PRJNA715461 1295 222 31801.677852 70599.72483144 Sarocladiaceae 2502719 Fungi Fungi 267 6.46e-67   NTclustered gi|157366947|gb|EU119045.1| 175243 g1221 i0 100 64.8648648648649 144 0 65 0 79 222 197 54 Uncultured ascomycete clone Biofilm3-16 small subunit ribosomal RNA gene, partial sequence blastn 14400 267 1 Eukaryota Opisthokonta Fungi Ascomycota         uncultured Ascomycota
19043980 19043980 PRJNA715461_S_NODE_1735_length_205_cov_17.272727_g1661_i0 PRJNA715461 1735 205 17.272727 35.40909035 Ascomycota 4890 Fungi Fungi 374 3.3599999999999997e-99   NTclustered gi|148357034|dbj|AB304771.1| 444778 g1661 i0 100 99.2292682926829 202 0 99 0 1 202 257 56 Candida phangngensis gene for 26S rRNA, partial sequence, strain: TM2-16 blastn 20342 374 1 Eukaryota Opisthokonta Fungi Ascomycota Dipodascomycetes Dipodascales   Yarrowia Yarrowia phangngaensis
22382709 22382709 PRJNA715461_S_NODE_998_length_249_cov_1.528409_g924_i0 PRJNA715461 998 249 1.528409 3.80573841 Capnodiales sp. 22MS03 1254183 Fungi Fungi 344 3.32e-90   NTclustered gi|411030840|gb|JX270306.1| 1254183 g924 i0 96.602 15.2128514056225 206 7 83 0 42 247 224 19 Capnodiales sp. 22MS03 28S-18S ribosomal RNA intergenic spacer, partial sequence blastn 3788 344 1 Eukaryota Opisthokonta Fungi Ascomycota Dothideomycetes Capnodiales     Capnodiales sp. 22MS03
25418742 25418742 PRJNA715461_S_NODE_640_length_329_cov_9483.503906_g566_i0 PRJNA715461 640 329 9483.503906 31200.72785074 Fungi 4751 Fungi Fungi 134 1.07e-26   NTclustered gi|1376792008|gb|MG372377.1| 47023 g566 i0 96.341 26.1641337386018 82 2 25 1 168 249 2880 2960 Orbilia vinosa voucher G.M. 2016-05-04-1 18S ribosomal RNA gene, partial sequence; internal transcribed spacer 1, 5.8S ribosomal RNA gene, and internal transcribed spacer 2, complete sequence; and 28S ribosomal RNA gene, partial sequence blastn 8608 134 1 Eukaryota Opisthokonta Fungi Ascomycota Orbiliomycetes Orbiliales Orbiliaceae Orbilia Orbilia vinosa

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;