RNAquarium Metadata Server
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contig_metadata

2 rows where bioproject = "PRJNA706190", tax_phylum = "Armatimonadota" and tax_superkingdom = "Bacteria"

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tax_superkingdom 1

  • Bacteria · 2 ✖

tax_phylum 1

  • Armatimonadota · 2 ✖

tax_kingdom 1

bioproject 1

  • PRJNA706190 · 2 ✖

analysis 1

tax_clade 0

Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
27252063 27252063 PRJNA706190_P_NODE_75123_length_165_cov_0.896552_g74987_i0 PRJNA706190 75123 165 0.896552 1.4793108 Bacteria 2 Bacteria Bacteria 93.6 1.63e-20   NR MDQ3812991.1 2033014 g74987 i0 78.2 3.98181818181818 55 12 100 0 165 1 310 364 MDQ3812991.1 excinuclease ABC subunit UvrC [Armatimonadota bacterium] diamond 657 94 0.995744680851064 Bacteria   Bacillati Armatimonadota         Armatimonadota bacterium
29420133 29420133 PRJNA706190_P_NODE_84649_length_163_cov_0.912281_g84513_i0 PRJNA706190 84649 163 0.912281 1.48701803 Armatimonadota bacterium 2033014 Bacteria Bacteria 42.4 0.0175   NR HEX2950726.1 2033014 g84513 i0 44.4 0.828220858895706 45 22 82.8 1 29 163 87 128 HEX2950726.1 hypothetical protein [Armatimonadota bacterium] diamond 135 42.4 1 Bacteria   Bacillati Armatimonadota         Armatimonadota bacterium

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;