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contig_metadata

9 rows where bioproject = "PRJNA706190" and tax_clade = "Sar"

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tax_phylum 2

analysis 2

tax_superkingdom 1

tax_clade 1

bioproject 1

  • PRJNA706190 · 9 ✖

tax_kingdom 0

Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
1191158 1191158 PRJNA706190_P_NODE_14161_length_221_cov_2.081395_g14025_i0 PRJNA706190 14161 221 2.081395 4.59988295 root 1 Root_unresolved Root_unresolved 398 2.1799999999999995e-106   NTclustered gi|345541658|gb|JN547815.1| 5911 g14025 i0 99.095 83.9954751131222 221 2 100 0 1 221 3547 3767 Tetrahymena thermophila strain ATCC 30382 18S ribosomal RNA gene, partial sequence; and internal transcribed spacer 1, 5.8S ribosomal RNA gene, internal transcribed spacer 2, and 26S ribosomal RNA gene, complete sequence blastn 18563 398 1 Eukaryota Sar   Ciliophora Oligohymenophorea Hymenostomatida Tetrahymenidae Tetrahymena Tetrahymena thermophila
2466414 2466414 PRJNA706190_P_NODE_28342_length_192_cov_5.272727_g28206_i0 PRJNA706190 28342 192 5.272727 10.12363584 root 1 Root_unresolved Root_unresolved 350 5.24e-92   NTclustered gi|10832|emb|X54512.1| 5911 g28206 i0 99.479 91.8541666666667 192 1 100 0 1 192 8314 8123 T. thermophila rdn A+ gene for pre-RNA, 17S rRNA, 5.8S rRNA, 26S rRNA blastn 17636 350 1 Eukaryota Sar   Ciliophora Oligohymenophorea Hymenostomatida Tetrahymenidae Tetrahymena Tetrahymena thermophila
8844102 8844102 PRJNA706190_P_NODE_8947_length_242_cov_1.792746_g8811_i0 PRJNA706190 8947 242 1.792746 4.33844532 Eukaryota 2759 SAR_Eukaryotes SAR_Eukaryotes 442 1.1099999999999995e-119   NTclustered gi|1837628855|gb|MN158348.1| 5909 g8811 i0 99.587 91.1818181818182 242 1 100 0 1 242 2702 2943 Tetrahymena rostrata strain TRAUS 18S ribosomal RNA gene, internal transcribed spacer 1, 5.8S ribosomal RNA gene, internal transcribed spacer 2, and 28S ribosomal RNA gene, complete sequence blastn 22066 442 1 Eukaryota Sar   Ciliophora Oligohymenophorea Hymenostomatida Tetrahymenidae Tetrahymena Tetrahymena rostrata
10906715 10906715 PRJNA706190_P_NODE_23489_length_200_cov_2.112583_g23353_i0 PRJNA706190 23489 200 2.112583 4.225166 Aphanomyces astaci 112090 SAR_Eukaryotes SAR_Eukaryotes 331 1.99e-86   NTclustered gi|256009645|gb|GQ374534.1| 112090 g23353 i0 96.5 83.395 200 7 100 0 1 200 185 384 Aphanomyces astaci strain Gb04 28S ribosomal RNA gene, partial sequence blastn 16679 331 1 Eukaryota Sar   Oomycota Saprolegniomycetes Saprolegniales Verrucalvaceae Aphanomyces Aphanomyces astaci
12670710 12670710 PRJNA706190_P_NODE_93950_length_152_cov_2.669903_g93814_i0 PRJNA706190 93950 152 2.669903 4.05825256 Euplotes 5935 SAR_Eukaryotes SAR_Eukaryotes 281 1.46e-71   NTclustered gi|1233819925|gb|KX516617.1| 440145 g93814 i0 100 90.0065789473684 152 0 100 0 1 152 159 8 Euplotes encysticus isolate B555 large subunit ribosomal RNA gene, partial sequence blastn 13681 281 1 Eukaryota Sar   Ciliophora Spirotrichea Euplotida Euplotidae Euplotes Euplotes encysticus
16005297 16005297 PRJNA706190_P_NODE_24033_length_199_cov_3.386667_g23897_i0 PRJNA706190 24033 199 3.386667 6.73946733 Tetrahymena pyriformis 5908 SAR_Eukaryotes SAR_Eukaryotes 340 3.2899999999999996e-89   NTclustered gi|1241841574|gb|KY273139.1| 5908 g23897 i0 97.487 21.6231155778894 199 5 100 0 1 199 206 8 Tetrahymena pyriformis isolate 1098-1 large subunit ribosomal RNA gene, partial sequence; macronuclear blastn 4303 340 1 Eukaryota Sar   Ciliophora Oligohymenophorea Hymenostomatida Tetrahymenidae Tetrahymena Tetrahymena pyriformis
22380257 22380257 PRJNA706190_P_NODE_6358_length_261_cov_2.018868_g6222_i0 PRJNA706190 6358 261 2.018868 5.26924548 Poteriospumella sp. 2003111 SAR_Eukaryotes SAR_Eukaryotes 483 7.12e-132   NTclustered gi|1209404931|gb|KX442736.1| 2003111 g6222 i0 100 95.8122605363985 261 0 100 0 1 261 1412 1152 Poteriospumella sp. strain JBAS36 18S ribosomal RNA gene, partial sequence; internal transcribed spacer 1, 5.8S ribosomal RNA gene, and internal transcribed spacer 2, complete sequence; and 28S ribosomal RNA gene, partial sequence blastn 25007 483 1 Eukaryota Sar     Chrysophyceae Chromulinales Dinobryaceae Poteriospumella Poteriospumella sp.
24142745 24142745 PRJNA706190_P_NODE_93819_length_156_cov_2.467290_g93683_i0 PRJNA706190 93819 156 2.46729 3.8489724 root 1 Root_unresolved Root_unresolved 283 4.1899999999999994e-72   NTclustered gi|10782|emb|X54004.1| 5908 g93683 i0 99.359 82.9294871794872 156 1 100 0 1 156 1755 1910 Tetrahymena pyriformis gene for 26S large subunit ribosomal RNA blastn 12937 283 1 Eukaryota Sar   Ciliophora Oligohymenophorea Hymenostomatida Tetrahymenidae Tetrahymena Tetrahymena pyriformis
32106613 32106613 PRJNA706190_P_NODE_32358_length_187_cov_1.137681_g32222_i0 PRJNA706190 32358 187 1.137681 2.12746347 Phytophthora megakarya 4795 SAR_Eukaryotes SAR_Eukaryotes 42.4 0.0102   NR OWZ04601.1 4795 g32222 i0 37.9 1.82887700534759 58 29 93 2 14 187 17 67 OWZ04601.1 hypothetical protein PHMEG_00023469 [Phytophthora megakarya] diamond 342 42.4 1 Eukaryota Sar   Oomycota Peronosporomycetes Peronosporales Peronosporaceae Phytophthora Phytophthora megakarya

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;