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contig_metadata

30 rows where bioproject = "PRJNA706190" and tax_clade = "PVC group"

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analysis 2

tax_superkingdom 1

tax_kingdom 1

tax_clade 1

  • PVC group · 30 ✖

bioproject 1

  • PRJNA706190 · 30 ✖
Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
19829646 19829646 PRJNA706190_P_NODE_38396_length_179_cov_1.446154_g38260_i0 PRJNA706190 38396 179 1.446154 2.58861566 Bremerella volcania 2527984 Bacteria Bacteria 191 3.08e-44   NTclustered gi|1712647354|gb|CP036289.1| 2527984 g38260 i0 87.135 5.64804469273743 171 19 94 3 10 178 4390749 4390580 Bremerella volcania strain Pan97 chromosome, complete genome blastn 1011 191 1 Bacteria PVC group Pseudomonadati Planctomycetota Planctomycetia Pirellulales Pirellulaceae Bremerella Bremerella volcania
26830458 26830458 PRJNA706190_P_NODE_13841_length_222_cov_4.456647_g13705_i0 PRJNA706190 13841 222 4.456647 9.89375634 Chlamydia psittaci C1/97 1112248 Bacteria Bacteria 79.7 8.66e-18   NR EPP30856.1 1112248 g13705 i0 67.2 0.864864864864865 64 20 86.5 1 213 22 1 63 EPP30856.1 nef attachable domain protein, partial [Chlamydia psittaci C1/97] diamond 192 79.7 1 Bacteria PVC group Pseudomonadati Chlamydiota Chlamydiia Chlamydiales Chlamydiaceae Chlamydia Chlamydia psittaci
27146250 27146250 PRJNA706190_P_NODE_33842_length_185_cov_1.308824_g33706_i0 PRJNA706190 33842 185 1.308824 2.4213244 Chlamydia psittaci 83554 Bacteria Bacteria 89.4 8.47e-22   NR EPL02319.1 1112253 g33706 i0 81.5 0.875675675675676 54 10 87.6 0 183 22 8 61 EPL02319.1 hypothetical protein CP02DC14_1934, partial [Chlamydia psittaci 02DC14] diamond 162 89.4 1 Bacteria PVC group Pseudomonadati Chlamydiota Chlamydiia Chlamydiales Chlamydiaceae Chlamydia Chlamydia psittaci
27146251 27146251 PRJNA706190_P_NODE_78102_length_164_cov_0.904348_g77966_i0 PRJNA706190 78102 164 0.904348 1.48313072 Chlamydia psittaci C1/97 1112248 Bacteria Bacteria 50.4 1.37e-6   NR EPP30359.1 1112248 g77966 i0 54.8 0.768292682926829 42 19 76.8 0 11 136 20 61 EPP30359.1 putative nef attachable protein [Chlamydia psittaci C1/97] diamond 126 50.4 1 Bacteria PVC group Pseudomonadati Chlamydiota Chlamydiia Chlamydiales Chlamydiaceae Chlamydia Chlamydia psittaci
27936413 27936413 PRJNA706190_P_NODE_3785_length_299_cov_8.268000_g3649_i0 PRJNA706190 3785 299 8.268 24.72132 Chlamydia psittaci 83554 Bacteria Bacteria 67.8 7.11e-13   NR EPJ26177.1 1112262 g3649 i0 73.8 0.421404682274247 42 11 42.1 0 143 18 1 42 EPJ26177.1 hypothetical protein CP03DC29_1347, partial [Chlamydia psittaci 03DC29] diamond 126 67.8 1 Bacteria PVC group Pseudomonadati Chlamydiota Chlamydiia Chlamydiales Chlamydiaceae Chlamydia Chlamydia psittaci
28199288 28199288 PRJNA706190_P_NODE_39066_length_178_cov_1.829457_g38930_i0 PRJNA706190 39066 178 1.8294570000000001 3.25643346 Planctomycetaceae 126 Bacteria Bacteria 112 2.13e-27   NR MBL8814682.1 37635 g38930 i0 92.6 9.10112359550562 54 4 91 0 1 162 123 176 MBL8814682.1 DUF1501 domain-containing protein [Planctomyces sp.] diamond 1620 113 0.991150442477876 Bacteria PVC group Pseudomonadati Planctomycetota Planctomycetia Planctomycetales Planctomycetaceae Planctomyces Planctomyces sp.
28409991 28409991 PRJNA706190_P_NODE_21466_length_204_cov_1.232258_g21330_i0 PRJNA706190 21466 204 1.232258 2.51380632 Kiritimatiellia bacterium 2212473 Bacteria Bacteria 120 4.769999999999999e-31   NR MFA7335065.1 2212473 g21330 i0 91.4 0.852941176470588 58 5 85.3 0 204 31 30 87 MFA7335065.1 hypothetical protein [Kiritimatiellia bacterium] diamond 174 120 1 Bacteria PVC group Pseudomonadati Kiritimatiellota Kiritimatiellia       Kiritimatiellia bacterium
28452255 28452255 PRJNA706190_P_NODE_10706_length_234_cov_0.751351_g10570_i0 PRJNA706190 10706 234 0.751351 1.75816134 Chlamydia 810 Bacteria Bacteria 52.8 5.39e-7   NR EPP30340.1 1112248 g10570 i0 43.5 1.76923076923077 69 39 88.5 0 208 2 2 70 EPP30340.1 nef attachable domain protein, partial [Chlamydia psittaci C1/97] diamond 414 52.8 1 Bacteria PVC group Pseudomonadati Chlamydiota Chlamydiia Chlamydiales Chlamydiaceae Chlamydia Chlamydia psittaci
28893967 28893967 PRJNA706190_P_NODE_35588_length_183_cov_1.164179_g35452_i0 PRJNA706190 35588 183 1.164179 2.13044757 Chlamydia 810 Bacteria Bacteria 58.2 1.31e-9   NR EPP32793.1 1112249 g35452 i0 81.8 6.52459016393443 33 6 54.1 0 106 8 2 34 EPP32793.1 nef attachable domain protein [Chlamydia psittaci C6/98] diamond 1194 58.5 0.994871794871795 Bacteria PVC group Pseudomonadati Chlamydiota Chlamydiia Chlamydiales Chlamydiaceae Chlamydia Chlamydia psittaci
29073167 29073167 PRJNA706190_P_NODE_90528_length_162_cov_0.920354_g90392_i0 PRJNA706190 90528 162 0.920354 1.49097348 Chlamydia psittaci 83554 Bacteria Bacteria 42.4 0.00157   NR EPJ19364.1 1112257 g90392 i0 66.7 0.555555555555556 30 10 55.6 0 1 90 1 30 EPJ19364.1 hypothetical protein CP02DC21_1118, partial [Chlamydia psittaci 02DC21] diamond 90 42.4 1 Bacteria PVC group Pseudomonadati Chlamydiota Chlamydiia Chlamydiales Chlamydiaceae Chlamydia Chlamydia psittaci
29136399 29136399 PRJNA706190_P_NODE_68289_length_166_cov_0.888889_g68153_i0 PRJNA706190 68289 166 0.888889 1.47555574 Chlamydia psittaci C1/97 1112248 Bacteria Bacteria 39.7 0.0183   NR EPP30344.1 1112248 g68153 i0 60 1.17469879518072 35 13 61.4 1 134 33 6 40 EPP30344.1 nef attachable domain protein [Chlamydia psittaci C1/97] diamond 195 39.7 1 Bacteria PVC group Pseudomonadati Chlamydiota Chlamydiia Chlamydiales Chlamydiaceae Chlamydia Chlamydia psittaci
29483195 29483195 PRJNA706190_P_NODE_23370_length_201_cov_0.980263_g23234_i0 PRJNA706190 23370 201 0.980263 1.97032863 Chlamydia psittaci 83554 Bacteria Bacteria 80.9 2.17e-18   NR EPJ17580.1 1112257 g23234 i0 69.6 1.83582089552239 56 17 83.6 0 201 34 4 59 EPJ17580.1 nef attachable domain protein, partial [Chlamydia psittaci 02DC21] diamond 369 80.9 1 Bacteria PVC group Pseudomonadati Chlamydiota Chlamydiia Chlamydiales Chlamydiaceae Chlamydia Chlamydia psittaci
29525741 29525741 PRJNA706190_P_NODE_93750_length_158_cov_4.394495_g93614_i0 PRJNA706190 93750 158 4.394495 6.9433021 Chlamydia 810 Bacteria Bacteria 47 3.11e-5   NR EPP32773.1 1112249 g93614 i0 83.3 1.59493670886076 24 4 45.6 0 150 79 19 42 EPP32773.1 putative lipoprotein, partial [Chlamydia psittaci C6/98] diamond 252 47 1 Bacteria PVC group Pseudomonadati Chlamydiota Chlamydiia Chlamydiales Chlamydiaceae Chlamydia Chlamydia psittaci
29577896 29577896 PRJNA706190_P_NODE_69730_length_166_cov_0.888889_g69594_i0 PRJNA706190 69730 166 0.888889 1.47555574 Chlamydia psittaci 83554 Bacteria Bacteria 58.2 1.07e-9   NR EPL05657.1 1112253 g69594 i0 69.8 0.77710843373494 43 13 77.7 0 164 36 13 55 EPL05657.1 nef attachable domain protein, partial [Chlamydia psittaci 02DC14] diamond 129 58.2 1 Bacteria PVC group Pseudomonadati Chlamydiota Chlamydiia Chlamydiales Chlamydiaceae Chlamydia Chlamydia psittaci
29830701 29830701 PRJNA706190_P_NODE_37651_length_180_cov_1.351145_g37515_i0 PRJNA706190 37651 180 1.351145 2.432061 Pirellulaceae bacterium 2699754 Bacteria Bacteria 41.6 0.0409   NR MEO2023680.1 2699754 g37515 i0 47.1 0.566666666666667 34 18 56.7 0 133 32 38 71 MEO2023680.1 carbohydrate-binding family 9-like protein [Pirellulaceae bacterium] diamond 102 41.6 1 Bacteria PVC group Pseudomonadati Planctomycetota Planctomycetia Pirellulales Pirellulaceae   Pirellulaceae bacterium
30652007 30652007 PRJNA706190_P_NODE_15753_length_217_cov_1.089286_g15617_i0 PRJNA706190 15753 217 1.089286 2.36375062 Chlamydia psittaci C1/97 1112248 Bacteria Bacteria 48.9 8.05e-6   NR EPP30344.1 1112248 g15617 i0 66.7 0.497695852534562 36 12 49.8 0 64 171 2 37 EPP30344.1 nef attachable domain protein [Chlamydia psittaci C1/97] diamond 108 48.9 1 Bacteria PVC group Pseudomonadati Chlamydiota Chlamydiia Chlamydiales Chlamydiaceae Chlamydia Chlamydia psittaci
30715312 30715312 PRJNA706190_P_NODE_594_length_716_cov_1.818591_g472_i0 PRJNA706190 594 716 1.818591 13.02111156 Chlamydia psittaci 83554 Bacteria Bacteria 55.5 9.34e-7   NR EPJ29041.1 1112269 g472 i0 79.3 0.121508379888268 29 6 12.2 0 22 108 10 38 EPJ29041.1 hypothetical protein CP09DC78_1106, partial [Chlamydia psittaci 09DC78] diamond 87 55.5 1 Bacteria PVC group Pseudomonadati Chlamydiota Chlamydiia Chlamydiales Chlamydiaceae Chlamydia Chlamydia psittaci
30873364 30873364 PRJNA706190_P_NODE_13874_length_222_cov_1.502890_g13738_i0 PRJNA706190 13874 222 1.50289 3.3364158 Pirellulaceae bacterium 2699754 Bacteria Bacteria 105 2.06e-25   NR MFN9911846.1 2699754 g13738 i0 79.7 0.932432432432432 69 14 93.2 0 219 13 1 69 MFN9911846.1 DUF937 domain-containing protein [Pirellulaceae bacterium] diamond 207 105 1 Bacteria PVC group Pseudomonadati Planctomycetota Planctomycetia Pirellulales Pirellulaceae   Pirellulaceae bacterium
31094482 31094482 PRJNA706190_P_NODE_1775_length_396_cov_1.360231_g1639_i0 PRJNA706190 1775 396 1.360231 5.38651476 Chlamydia psittaci 83554 Bacteria Bacteria 70.5 1.78e-13   NR EPJ16938.1 1112257 g1639 i0 79.5 0.333333333333333 44 7 32.6 2 284 156 1 43 EPJ16938.1 hypothetical protein CP02DC21_1876 [Chlamydia psittaci 02DC21] diamond 132 70.5 1 Bacteria PVC group Pseudomonadati Chlamydiota Chlamydiia Chlamydiales Chlamydiaceae Chlamydia Chlamydia psittaci
31220651 31220651 PRJNA706190_P_NODE_88135_length_163_cov_0.807018_g87999_i0 PRJNA706190 88135 163 0.807018 1.31543934 Chlamydia psittaci 83554 Bacteria Bacteria 44.7 2.12e-4   NR EPJ19409.1 1112257 g87999 i0 56.8 0.680981595092024 37 16 68.1 0 44 154 5 41 EPJ19409.1 hypothetical protein CP02DC21_1087, partial [Chlamydia psittaci 02DC21] diamond 111 44.7 1 Bacteria PVC group Pseudomonadati Chlamydiota Chlamydiia Chlamydiales Chlamydiaceae Chlamydia Chlamydia psittaci
31442326 31442326 PRJNA706190_P_NODE_64656_length_167_cov_0.881356_g64520_i0 PRJNA706190 64656 167 0.881356 1.47186452 Chlamydia psittaci 83554 Bacteria Bacteria 47 2.37e-5   NR EPJ16761.1 1112257 g64520 i0 53.7 0.736526946107784 41 19 73.7 0 143 21 2 42 EPJ16761.1 hypothetical protein CP02DC21_1886 [Chlamydia psittaci 02DC21] diamond 123 47 1 Bacteria PVC group Pseudomonadati Chlamydiota Chlamydiia Chlamydiales Chlamydiaceae Chlamydia Chlamydia psittaci
31537421 31537421 PRJNA706190_P_NODE_40636_length_176_cov_3.401575_g40500_i0 PRJNA706190 40636 176 3.401575 5.986772 Chlamydia psittaci 83554 Bacteria Bacteria 72.8 2.11e-15   NR EPJ16717.1 1112257 g40500 i0 70.9 1.875 55 16 93.8 0 167 3 3 57 EPJ16717.1 nef attachable domain protein, partial [Chlamydia psittaci 02DC21] diamond 330 72.8 1 Bacteria PVC group Pseudomonadati Chlamydiota Chlamydiia Chlamydiales Chlamydiaceae Chlamydia Chlamydia psittaci
31853441 31853441 PRJNA706190_P_NODE_48237_length_169_cov_0.866667_g48101_i0 PRJNA706190 48237 169 0.866667 1.46466723 Chlamydia psittaci 83554 Bacteria Bacteria 47.4 1.7e-5   NR EPJ26271.1 1112262 g48101 i0 56.4 0.692307692307692 39 17 69.2 0 165 49 4 42 EPJ26271.1 nef attachable domain protein, partial [Chlamydia psittaci 03DC29] diamond 117 47.4 1 Bacteria PVC group Pseudomonadati Chlamydiota Chlamydiia Chlamydiales Chlamydiaceae Chlamydia Chlamydia psittaci
31927385 31927385 PRJNA706190_P_NODE_3457_length_307_cov_2.585271_g3321_i0 PRJNA706190 3457 307 2.585271 7.93678197 PVC group 1783257 Bacteria Bacteria 130 2.11e-35   NR CQB88119.1 813 g3321 i0 81.3 4.39739413680782 75 13 72.3 1 62 283 152 226 CQB88119.1 Thiol-activated cytolysin [Chlamydia trachomatis] diamond 1350 130 1 Bacteria PVC group Pseudomonadati Chlamydiota Chlamydiia Chlamydiales Chlamydiaceae Chlamydia Chlamydia trachomatis
32011763 32011763 PRJNA706190_P_NODE_74058_length_165_cov_0.896552_g73922_i0 PRJNA706190 74058 165 0.896552 1.4793108 Chlamydia psittaci C6/98 1112249 Bacteria Bacteria 67.8 2.2e-13   NR EPP32998.1 1112249 g73922 i0 64.2 0.963636363636364 53 19 96.4 0 164 6 15 67 EPP32998.1 nef attachable domain protein, partial [Chlamydia psittaci C6/98] diamond 159 67.8 1 Bacteria PVC group Pseudomonadati Chlamydiota Chlamydiia Chlamydiales Chlamydiaceae Chlamydia Chlamydia psittaci
32360072 32360072 PRJNA706190_P_NODE_82479_length_164_cov_0.860870_g82343_i0 PRJNA706190 82479 164 0.86087 1.4118268 Planctomycetales bacterium 2053591 Bacteria Bacteria 41.2 0.0449   NR MFN0052616.1 2053591 g82343 i0 50 0.585365853658537 32 16 58.5 0 145 50 122 153 MFN0052616.1 vWA domain-containing protein [Planctomycetales bacterium] diamond 96 41.2 1 Bacteria PVC group Pseudomonadati Planctomycetota Planctomycetia Planctomycetales     Planctomycetales bacterium
32465483 32465483 PRJNA706190_P_NODE_93739_length_159_cov_2.100000_g93603_i0 PRJNA706190 93739 159 2.1 3.339 Chlamydia 810 Bacteria Bacteria 44.3 6.3e-4   NR SGA00112.1 83555 g93603 i0 68 1.62264150943396 25 8 47.2 0 110 36 65 89 SGA00112.1 Uncharacterised protein [Chlamydia abortus] diamond 258 44.3 1 Bacteria PVC group Pseudomonadati Chlamydiota Chlamydiia Chlamydiales Chlamydiaceae Chlamydia Chlamydia abortus
32528810 32528810 PRJNA706190_P_NODE_41679_length_175_cov_1.357143_g41543_i0 PRJNA706190 41679 175 1.357143 2.37500025 Chlamydia 810 Bacteria Bacteria 111 2.21e-28   NR EPL02379.1 1112253 g41543 i0 89.3 1.92 56 6 96 0 1 168 211 266 EPL02379.1 FAM27E3 domain protein, partial [Chlamydia psittaci 02DC14] diamond 336 111 1 Bacteria PVC group Pseudomonadati Chlamydiota Chlamydiia Chlamydiales Chlamydiaceae Chlamydia Chlamydia psittaci
32612679 32612679 PRJNA706190_P_NODE_28200_length_193_cov_1.006944_g28064_i0 PRJNA706190 28200 193 1.006944 1.94340192 Chlamydia psittaci 83554 Bacteria Bacteria 71.6 9.93e-15   NR EPL02817.1 1112253 g28064 i0 70.9 0.854922279792746 55 16 85.5 0 165 1 1 55 EPL02817.1 nef attachable domain protein, partial [Chlamydia psittaci 02DC14] diamond 165 71.6 1 Bacteria PVC group Pseudomonadati Chlamydiota Chlamydiia Chlamydiales Chlamydiaceae Chlamydia Chlamydia psittaci
32707058 32707058 PRJNA706190_P_NODE_5340_length_272_cov_1.816143_g5204_i0 PRJNA706190 5340 272 1.816143 4.93990896 Chlamydia psittaci 83554 Bacteria Bacteria 50.4 1.68e-5   NR EPJ26098.1 1112269 g5204 i0 100 0.220588235294118 20 0 22.1 0 121 62 1 20 EPJ26098.1 hypothetical protein CP09DC78_1307B, partial [Chlamydia psittaci 09DC78] diamond 60 50.4 1 Bacteria PVC group Pseudomonadati Chlamydiota Chlamydiia Chlamydiales Chlamydiaceae Chlamydia Chlamydia psittaci

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;