RNAquarium Metadata Server
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contig_metadata

4 rows where bioproject = "PRJNA706190", tax_clade = "Opisthokonta" and tax_phylum = "Microsporidia"

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analysis 2

tax_superkingdom 1

tax_phylum 1

  • Microsporidia · 4 ✖

tax_kingdom 1

tax_clade 1

  • Opisthokonta · 4 ✖

bioproject 1

  • PRJNA706190 · 4 ✖
Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
8356019 8356019 PRJNA706190_P_NODE_32867_length_186_cov_2.131387_g32731_i0 PRJNA706190 32867 186 2.131387 3.96437982 Tubulinosema ratisbonensis 291195 Fungi Fungi 331 1.82e-86   NTclustered gi|51860783|gb|AY695845.1| 291195 g32731 i0 99.451 40.5483870967742 182 1 98 0 5 186 1255 1074 Tubulinosema ratisbonensis small subunit ribosomal RNA gene, partial sequence; intergenic spacer region, complete sequence; and large subunit ribosomal RNA gene, partial sequence blastn 7542 331 1 Eukaryota Opisthokonta Fungi Microsporidia     Tubulinosematidae Tubulinosema Tubulinosema ratisbonensis
27020258 27020258 PRJNA706190_P_NODE_24142_length_199_cov_1.386667_g24006_i0 PRJNA706190 24142 199 1.386667 2.75946733 Tubulinosema ratisbonensis 291195 Fungi Fungi 120 1.87e-30   NR RVD92564.1 291195 g24006 i0 100 0.979899497487437 65 0 98 0 197 3 43 107 RVD92564.1 hypothetical protein TUBRATIS_009260 [Tubulinosema ratisbonensis] diamond 195 120 1 Eukaryota Opisthokonta Fungi Microsporidia     Tubulinosematidae Tubulinosema Tubulinosema ratisbonensis
27399697 27399697 PRJNA706190_P_NODE_13203_length_224_cov_2.268571_g13067_i0 PRJNA706190 13203 224 2.268571 5.08159904 Tubulinosema ratisbonensis 291195 Fungi Fungi 136 2.72e-38   NR RVD92499.1 291195 g13067 i0 95.7 0.9375 70 3 93.8 0 13 222 1 70 RVD92499.1 small GTP-binding domain protein [Tubulinosema ratisbonensis] diamond 210 136 1 Eukaryota Opisthokonta Fungi Microsporidia     Tubulinosematidae Tubulinosema Tubulinosema ratisbonensis
28820033 28820033 PRJNA706190_P_NODE_77008_length_164_cov_1.808696_g76872_i0 PRJNA706190 77008 164 1.808696 2.96626144 Tubulinosema ratisbonensis 291195 Fungi Fungi 107 1.24e-27   NR RVD92807.1 291195 g76872 i0 100 0.98780487804878 54 0 98.8 0 164 3 72 125 RVD92807.1 ER to Golgi transport membrane [Tubulinosema ratisbonensis] diamond 162 107 1 Eukaryota Opisthokonta Fungi Microsporidia     Tubulinosematidae Tubulinosema Tubulinosema ratisbonensis

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;