RNAquarium Metadata Server
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contig_metadata

2 rows where bioproject = "PRJNA704949" and tax_phylum = "Negarnaviricota"

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tax_superkingdom 1

tax_phylum 1

  • Negarnaviricota · 2 ✖

tax_kingdom 1

bioproject 1

  • PRJNA704949 · 2 ✖

analysis 1

tax_clade 0

Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
2462677 2462677 PRJNA704949_P_NODE_1748642_length_181_cov_1.575758_g1733303_i0 PRJNA704949 1748642 181 1.575758 2.85212198 Vesiculovirus 11271 Viruses Viruses 320 3.82e-83   NTclustered gi|61832|emb|V01213.1| 11276 g1733303 i0 99.432 97.2044198895028 176 1 97 0 6 181 256 431 Vesicular stomatitis virus gene fragment encoding the G protein blastn 17594 320 1 Viruses   Orthornavirae Negarnaviricota Monjiviricetes Mononegavirales Rhabdoviridae Vesiculovirus Vesicular stomatitis virus
5019248 5019248 PRJNA704949_P_NODE_95364_length_800_cov_4.909454_g83061_i0 PRJNA704949 95364 800 4.909454 39.275632 root 1 Root_unresolved Root_unresolved 1445 0   NTclustered gi|2649349941|gb|OR995580.1| 11276 g83061 i0 100 98.79625 782 0 98 0 19 800 3498 4279 Mutant Vesicular stomatitis virus clone recombinant VSVdM51-RBD, complete genome blastn 79037 1445 1 Viruses   Orthornavirae Negarnaviricota Monjiviricetes Mononegavirales Rhabdoviridae Vesiculovirus Vesicular stomatitis virus

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;