RNAquarium Metadata Server
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contig_metadata

3 rows where bioproject = "PRJNA704949" and tax_phylum = "Candidatus Schekmaniibacteriota"

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tax_superkingdom 1

tax_phylum 1

  • Candidatus Schekmaniibacteriota · 3 ✖

tax_clade 1

bioproject 1

  • PRJNA704949 · 3 ✖

analysis 1

tax_kingdom 0

Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
29493943 29493943 PRJNA704949_P_NODE_139010_length_683_cov_1.640379_g125746_i0 PRJNA704949 139010 683 1.640379 11.20378857 Pseudomonadati 3379134 Bacteria Bacteria 84.3 5.2e-17   NR OGL43952.1 1817879 g125746 i0 51.9 2.77159590043924 81 39 35.6 0 89 331 29 109 OGL43952.1 MAG: hypothetical protein A2W05_08240 [Candidatus Schekmanbacteria bacterium RBG_16_38_10] diamond 1893 84.3 1 Bacteria Bacteria candidate phyla   Candidatus Schekmaniibacteriota         Candidatus Schekmanbacteria bacterium RBG_16_38_10
30841213 30841213 PRJNA704949_P_NODE_1112214_length_244_cov_0.764103_g1096878_i0 PRJNA704949 1112214 244 0.764103 1.86441132 Candidatus Schekmanbacteria bacterium 2419984 Bacteria Bacteria 85.1 4.38e-18   NR MBI2571978.1 2419984 g1096878 i0 65.5 1.42622950819672 58 20 71.3 0 70 243 18 75 MBI2571978.1 class I SAM-dependent methyltransferase [Candidatus Schekmanbacteria bacterium] diamond 348 85.1 1 Bacteria Bacteria candidate phyla   Candidatus Schekmaniibacteriota         Candidatus Schekmanbacteria bacterium
32560478 32560478 PRJNA704949_P_NODE_46139_length_1127_cov_2.089981_g35788_i0 PRJNA704949 46139 1127 2.089981 23.55408587 Bacteria 2 Bacteria Bacteria 348 1.7799999999999996e-115   NR MBI2571106.1 2419984 g35788 i0 68.4 3.94232475598935 247 78 65.7 0 2 742 67 313 MBI2571106.1 radical SAM protein [Candidatus Schekmanbacteria bacterium] diamond 4443 348 1 Bacteria Bacteria candidate phyla   Candidatus Schekmaniibacteriota         Candidatus Schekmanbacteria bacterium

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;