RNAquarium Metadata Server
Institute Website Terms of Use Privacy Policy

contig_metadata

11 rows where bioproject = "PRJNA704949" and tax_phylum = "Candidatus Poribacteria"

✎ View and edit SQL

This data as json, CSV (advanced)

analysis 2

tax_superkingdom 1

tax_phylum 1

  • Candidatus Poribacteria · 11 ✖

tax_clade 1

bioproject 1

  • PRJNA704949 · 11 ✖

tax_kingdom 0

Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
5800882 5800882 PRJNA704949_P_NODE_386605_length_437_cov_1.453608_g371527_i0 PRJNA704949 386605 437 1.453608 6.35226696 Candidatus Poribacteria bacterium 2026781 Bacteria Bacteria 104 9.69e-25   NR GIX06626.1 2026781 g371527 i0 72.2 3.03432494279176 72 20 49.4 0 255 40 4 75 GIX06626.1 MAG: 2,3-bisphosphoglycerate-dependent phosphoglycerate mutase [Candidatus Poribacteria bacterium] diamond 1326 104 1 Bacteria Bacteria candidate phyla   Candidatus Poribacteria         Candidatus Poribacteria bacterium
8351389 8351389 PRJNA704949_P_NODE_480907_length_393_cov_1.427326_g465672_i0 PRJNA704949 480907 393 1.427326 5.60939118 Candidatus Poribacteria bacterium 2026781 Bacteria Bacteria 65.8 4.83e-6   NTclustered gi|2621703767|emb|OY762722.1| 2026781 g465672 i0 95.238 2.98473282442748 42 1 10 1 279 319 1345184 1345225 MAG: Candidatus Poribacteria bacterium isolate ed6806d3-dd7a-4409-98ee-5b7e1ebe3502 genome assembly, chromosome: 1 blastn 1173 65.8 1 Bacteria Bacteria candidate phyla   Candidatus Poribacteria         Candidatus Poribacteria bacterium
28136485 28136485 PRJNA704949_P_NODE_69485_length_922_cov_2.281787_g57966_i0 PRJNA704949 69485 922 2.281787 21.03807614 Bacteria 2 Bacteria Bacteria 239 8.689999999999998e-69   NR MDQ1316931.1 2026781 g57966 i0 71.6 2.09869848156182 162 46 52.7 0 1 486 679 840 MDQ1316931.1 hypothetical protein [Candidatus Poribacteria bacterium] diamond 1935 239 1 Bacteria Bacteria candidate phyla   Candidatus Poribacteria         Candidatus Poribacteria bacterium
29083583 29083583 PRJNA704949_P_NODE_1597488_length_193_cov_1.083333_g1582149_i0 PRJNA704949 1597488 193 1.083333 2.09083269 Pseudomonadati 3379134 Bacteria Bacteria 77 1.55e-14   NR MBI5116185.1 2026781 g1582149 i0 62.5 1.9740932642487 64 19 99.5 1 2 193 261 319 MBI5116185.1 glycogen synthase GlgA [Candidatus Poribacteria bacterium] diamond 381 77 1 Bacteria Bacteria candidate phyla   Candidatus Poribacteria         Candidatus Poribacteria bacterium
29703859 29703859 PRJNA704949_P_NODE_397970_length_431_cov_1.361257_g382870_i0 PRJNA704949 397970 431 1.361257 5.86701767 Candidatus Poribacteria bacterium 2026781 Bacteria Bacteria 191 1.0199999999999998e-57   NR MDE0184101.1 2026781 g382870 i0 65.5 4.93503480278422 142 49 98.8 0 431 6 78 219 MDE0184101.1 methylisocitrate lyase [Candidatus Poribacteria bacterium] diamond 2127 191 1 Bacteria Bacteria candidate phyla   Candidatus Poribacteria         Candidatus Poribacteria bacterium
30114513 30114513 PRJNA704949_P_NODE_1495632_length_201_cov_1.710526_g1480294_i0 PRJNA704949 1495632 201 1.710526 3.43815726 Candidatus Poribacteria bacterium 2026781 Bacteria Bacteria 42.4 0.0294   NR HHZ93559.1 2026781 g1480294 i0 39.3 2.22388059701493 56 32 80.6 1 191 30 634 689 HHZ93559.1 hypothetical protein [Candidatus Poribacteria bacterium] diamond 447 42.4 1 Bacteria Bacteria candidate phyla   Candidatus Poribacteria         Candidatus Poribacteria bacterium
30714791 30714791 PRJNA704949_P_NODE_125714_length_712_cov_2.509804_g112686_i0 PRJNA704949 125714 712 2.509804 17.86980448 Candidatus Poribacteria bacterium 2026781 Bacteria Bacteria 219 2.7799999999999998e-68   NR MBI5154030.1 2026781 g112686 i0 55.6 0.825842696629214 196 87 82.6 0 588 1 1 196 MBI5154030.1 metal-dependent hydrolase [Candidatus Poribacteria bacterium] diamond 588 219 1 Bacteria Bacteria candidate phyla   Candidatus Poribacteria         Candidatus Poribacteria bacterium
31884843 31884843 PRJNA704949_P_NODE_327957_length_471_cov_3.033175_g313038_i0 PRJNA704949 327957 471 3.033175 14.28625425 Candidatus Poribacteria bacterium 2026781 Bacteria Bacteria 49.7 0.00145   NR MFC1718514.1 2026781 g313038 i0 38.9 0.45859872611465 72 40 43.9 2 455 249 351 421 MFC1718514.1 PAS domain S-box protein [Candidatus Poribacteria bacterium] diamond 216 49.7 1 Bacteria Bacteria candidate phyla   Candidatus Poribacteria         Candidatus Poribacteria bacterium
32265083 32265083 PRJNA704949_P_NODE_821498_length_293_cov_2.045082_g806165_i0 PRJNA704949 821498 293 2.045082 5.99209026 Candidatus Poribacteria bacterium 2026781 Bacteria Bacteria 44.3 0.0182   NR MXZ01092.1 2026781 g806165 i0 71.4 0.286689419795222 28 8 28.7 0 206 289 5 32 MXZ01092.1 DUF4062 domain-containing protein [Candidatus Poribacteria bacterium] diamond 84 44.3 1 Bacteria Bacteria candidate phyla   Candidatus Poribacteria         Candidatus Poribacteria bacterium
32359720 32359720 PRJNA704949_P_NODE_1878959_length_172_cov_1.268293_g1863620_i0 PRJNA704949 1878959 172 1.268293 2.18146396 Candidatus Poribacteria bacterium 2026781 Bacteria Bacteria 56.2 2.51e-7   NR MEK7398426.1 2026781 g1863620 i0 47.2 0.924418604651163 53 28 92.4 0 5 163 544 596 MEK7398426.1 DUF2723 domain-containing protein [Candidatus Poribacteria bacterium] diamond 159 56.2 1 Bacteria Bacteria candidate phyla   Candidatus Poribacteria         Candidatus Poribacteria bacterium
32769921 32769921 PRJNA704949_P_NODE_783860_length_301_cov_3.313492_g768528_i0 PRJNA704949 783860 301 3.313492 9.97361092 Candidatus Poribacteria bacterium 2026781 Bacteria Bacteria 70.9 9.96e-12   NR MDE0185016.1 2026781 g768528 i0 45.8 1.37541528239203 72 39 71.8 0 283 68 735 806 MDE0185016.1 ankyrin repeat domain-containing protein [Candidatus Poribacteria bacterium] diamond 414 70.9 1 Bacteria Bacteria candidate phyla   Candidatus Poribacteria         Candidatus Poribacteria bacterium

Advanced export

JSON shape: default, array, newline-delimited

CSV options: 

CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;