RNAquarium Metadata Server
Institute Website Terms of Use Privacy Policy

contig_metadata

4 rows where bioproject = "PRJNA704949" and tax_phylum = "Candidatus Deferrimicrobiota"

✎ View and edit SQL

This data as json, CSV (advanced)

tax_superkingdom 1

tax_phylum 1

  • Candidatus Deferrimicrobiota · 4 ✖

bioproject 1

  • PRJNA704949 · 4 ✖

analysis 1

tax_kingdom 0

tax_clade 0

Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
701712 701712 PRJNA704949_P_NODE_90321_length_819_cov_3.431169_g78159_i0 PRJNA704949 90321 819 3.431169 28.10127411 Candidatus Deferrimicrobiaceae bacterium 3069220 Bacteria Bacteria 175 2.8e-49   NR HEY7586657.1 3069220 g78159 i0 36.3 1.95604395604396 267 127 97.4 3 818 21 83 307 HEY7586657.1 hypothetical protein [Candidatus Deferrimicrobiaceae bacterium] diamond 1602 175 1 Bacteria     Candidatus Deferrimicrobiota Candidatus Deferrimicrobia Candidatus Deferrimicrobiales Candidatus Deferrimicrobiaceae   Candidatus Deferrimicrobiaceae bacterium
24924646 24924646 PRJNA704949_P_NODE_485120_length_391_cov_1.976608_g469882_i0 PRJNA704949 485120 391 1.976608 7.72853728 Candidatus Deferrimicrobium sp. 3060586 Bacteria Bacteria 123 1.57e-33   NR HZW02104.1 3060586 g469882 i0 90.8 0.583120204603581 76 7 58.3 0 162 389 1 76 HZW02104.1 50S ribosomal protein L18 [Candidatus Deferrimicrobium sp.] diamond 228 123 1 Bacteria     Candidatus Deferrimicrobiota Candidatus Deferrimicrobia Candidatus Deferrimicrobiales Candidatus Deferrimicrobiaceae Candidatus Deferrimicrobium Candidatus Deferrimicrobium sp.
29798487 29798487 PRJNA704949_P_NODE_1147051_length_239_cov_1.326316_g1131715_i0 PRJNA704949 1147051 239 1.326316 3.16989524 Candidatus Deferrimicrobium sp. 3060586 Bacteria Bacteria 86.7 1.42e-19   NR HZV99959.1 3060586 g1131715 i0 92.7 0.514644351464435 41 3 51.5 0 3 125 99 139 HZV99959.1 hypothetical protein [Candidatus Deferrimicrobium sp.] diamond 123 86.7 1 Bacteria     Candidatus Deferrimicrobiota Candidatus Deferrimicrobia Candidatus Deferrimicrobiales Candidatus Deferrimicrobiaceae Candidatus Deferrimicrobium Candidatus Deferrimicrobium sp.
32675277 32675277 PRJNA704949_P_NODE_352580_length_456_cov_1.899263_g337589_i0 PRJNA704949 352580 456 1.899263 8.66063928 Candidatus Deferrimicrobiaceae bacterium 3069220 Bacteria Bacteria 189 3.489999999999999e-55   NR HSL97383.1 3069220 g337589 i0 73.8 0.855263157894737 130 34 85.5 0 11 400 324 453 HSL97383.1 hypothetical protein [Candidatus Deferrimicrobiaceae bacterium] diamond 390 189 1 Bacteria     Candidatus Deferrimicrobiota Candidatus Deferrimicrobia Candidatus Deferrimicrobiales Candidatus Deferrimicrobiaceae   Candidatus Deferrimicrobiaceae bacterium

Advanced export

JSON shape: default, array, newline-delimited

CSV options: 

CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;