contig_metadata
28 rows where bioproject = "PRJNA704949" and tax_kingdom = "Orthornavirae"
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| Link | rowid ▼ | query | bioproject | node | length | coverage | rel_abundance | taxname_lca | taxid_lca | taxoncategory | taxoncategorysimple | bits | evalue | lowcoverage_flag | analysis_used | target | taxid | gene | allele | pident | sumperc_cov | alnlen | mismatch | qcov | gapopen | qstart | qend | tstart | tend | target_title | analysis | sumalnlen | maxbits | bits_percmax | tax_superkingdom | tax_clade | tax_kingdom | tax_phylum | tax_class | tax_order | tax_family | tax_genus | tax_species |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 1973147 | 1973147 | PRJNA704949_P_NODE_37362_length_1268_cov_7.850697_g27610_i0 | PRJNA704949 | 37362 | 1268 | 7.850697 | 99.54683796 | Malassezia restricta virus MrV40L | 2727863 | Viruses | Viruses | 2242 | 0 | NTclustered | gi|1832308141|gb|MN603497.1| | 2727863 | g27610 | i0 | 98.58 | 1 | 1268 | 18 | 100 | 0 | 1 | 1268 | 2739 | 1472 | Malassezia restricta virus MrV40L, complete genome | blastn | 1268 | 2242 | 1 | Viruses | Orthornavirae | Duplornaviricota | Chrymotiviricetes | Ghabrivirales | Totiviridae | Malassezia restricta virus MrV40L | |||
| 2462677 | 2462677 | PRJNA704949_P_NODE_1748642_length_181_cov_1.575758_g1733303_i0 | PRJNA704949 | 1748642 | 181 | 1.575758 | 2.85212198 | Vesiculovirus | 11271 | Viruses | Viruses | 320 | 3.82e-83 | NTclustered | gi|61832|emb|V01213.1| | 11276 | g1733303 | i0 | 99.432 | 97.2044198895028 | 176 | 1 | 97 | 0 | 6 | 181 | 256 | 431 | Vesicular stomatitis virus gene fragment encoding the G protein | blastn | 17594 | 320 | 1 | Viruses | Orthornavirae | Negarnaviricota | Monjiviricetes | Mononegavirales | Rhabdoviridae | Vesiculovirus | Vesicular stomatitis virus | ||
| 5019248 | 5019248 | PRJNA704949_P_NODE_95364_length_800_cov_4.909454_g83061_i0 | PRJNA704949 | 95364 | 800 | 4.909454 | 39.275632 | root | 1 | Root_unresolved | Root_unresolved | 1445 | 0 | NTclustered | gi|2649349941|gb|OR995580.1| | 11276 | g83061 | i0 | 100 | 98.79625 | 782 | 0 | 98 | 0 | 19 | 800 | 3498 | 4279 | Mutant Vesicular stomatitis virus clone recombinant VSVdM51-RBD, complete genome | blastn | 79037 | 1445 | 1 | Viruses | Orthornavirae | Negarnaviricota | Monjiviricetes | Mononegavirales | Rhabdoviridae | Vesiculovirus | Vesicular stomatitis virus | ||
| 8343837 | 8343837 | PRJNA704949_P_NODE_1581947_length_194_cov_1.331034_g1566608_i0 | PRJNA704949 | 1581947 | 194 | 1.331034 | 2.58220596 | Malassezia restricta virus MrV40L | 2727863 | Viruses | Viruses | 353 | 4.1e-93 | NTclustered | gi|1832308141|gb|MN603497.1| | 2727863 | g1566608 | i0 | 99.485 | 1.70103092783505 | 194 | 1 | 100 | 0 | 1 | 194 | 3492 | 3299 | Malassezia restricta virus MrV40L, complete genome | blastn | 330 | 353 | 1 | Viruses | Orthornavirae | Duplornaviricota | Chrymotiviricetes | Ghabrivirales | Totiviridae | Malassezia restricta virus MrV40L | |||
| 8838828 | 8838828 | PRJNA704949_P_NODE_1241107_length_227_cov_1.752809_g1225770_i0 | PRJNA704949 | 1241107 | 227 | 1.752809 | 3.97887643 | Viruses | 10239 | Viruses | Viruses | 69.4 | 2.01e-7 | NTclustered | gi|2557652486|emb|OY682391.1| | 2697049 | g1225770 | i0 | 95.455 | 16.8370044052863 | 44 | 0 | 19 | 2 | 1 | 44 | 11279 | 11238 | Severe acute respiratory syndrome coronavirus 2 genome assembly, complete genome: monopartite | blastn | 3822 | 69.4 | 1 | Viruses | Orthornavirae | Pisuviricota | Pisoniviricetes | Nidovirales | Coronaviridae | Betacoronavirus | Betacoronavirus pandemicum | ||
| 12180013 | 12180013 | PRJNA704949_P_NODE_772610_length_304_cov_1.819608_g757279_i0 | PRJNA704949 | 772610 | 304 | 1.819608 | 5.53160832 | Fish-associated picorna-like virus 3 | 3003959 | Viruses | Viruses | 52.8 | 0.028 | NTclustered | gi|2196304047|gb|MZ679036.1| | 3003959 | g757279 | i0 | 94.286 | 0.115131578947368 | 35 | 1 | 12 | 1 | 143 | 177 | 4155 | 4188 | MAG: Picornavirales sp. isolate s56-k141_864870 putative polyprotein gene, complete cds | blastn | 35 | 52.8 | 1 | Viruses | Orthornavirae | Pisuviricota | Pisoniviricetes | Picornavirales | Fish-associated picorna-like virus 3 | ||||
| 12181119 | 12181119 | PRJNA704949_P_NODE_905270_length_276_cov_4.528634_g889936_i0 | PRJNA704949 | 905270 | 276 | 4.528634 | 12.49902984 | Plasmopara viticola lesion associated ourmia-like virus 25 | 2686493 | Viruses | Viruses | 100 | 2.66e-22 | NR | YP_010800225.1 | 2686493 | g889936 | i0 | 71.6 | 0.728260869565217 | 67 | 19 | 72.8 | 0 | 60 | 260 | 3 | 69 | YP_010800225.1 RNA dependent RNA polymerase [Plasmopara viticola lesion associated ourmia-like virus 25] | diamond | 201 | 100 | 1 | Viruses | Orthornavirae | Lenarviricota | Miaviricetes | Ourlivirales | Botourmiaviridae | Magoulivirus | Magoulivirus fiplasmoparae | ||
| 14725031 | 14725031 | PRJNA704949_P_NODE_273672_length_511_cov_3.461039_g259002_i0 | PRJNA704949 | 273672 | 511 | 3.461039 | 17.68590929 | Ilarvirus PNRSV | 3429931 | Viruses | Viruses | 939 | 0 | NTclustered | gi|1530829376|gb|MH427285.1| | 37733 | g259002 | i0 | 99.804 | 99.9804305283757 | 511 | 1 | 100 | 0 | 1 | 511 | 337 | 847 | Prunus necrotic ringspot virus isolate PNRSV-RNA3-SA movement protein and coat protein genes, complete cds | blastn | 51090 | 939 | 1 | Viruses | Orthornavirae | Kitrinoviricota | Alsuviricetes | Martellivirales | Bromoviridae | Ilarvirus | Ilarvirus PNRSV | ||
| 19816065 | 19816065 | PRJNA704949_P_NODE_1396996_length_210_cov_2.260870_g1381658_i0 | PRJNA704949 | 1396996 | 210 | 2.26087 | 4.747827 | Tobamovirus rapae | 3432887 | Viruses | Viruses | 383 | 5.75e-102 | NTclustered | gi|691192970|gb|KM067150.1| | 29272 | g1381658 | i0 | 99.524 | 17.947619047619 | 210 | 1 | 100 | 0 | 1 | 210 | 440 | 231 | Turnip vein-clearing virus isolate Minnesota movement protein (MP) and coat protein (CP) genes, partial cds | blastn | 3769 | 383 | 1 | Viruses | Orthornavirae | Kitrinoviricota | Alsuviricetes | Martellivirales | Virgaviridae | Tobamovirus | Tobamovirus rapae | ||
| 19824876 | 19824876 | PRJNA704949_P_NODE_460116_length_401_cov_3.642045_g444905_i0 | PRJNA704949 | 460116 | 401 | 3.642045 | 14.60460045 | Totiviridae sp. | 1955172 | Viruses | Viruses | 243 | 2.12e-59 | NTclustered | gi|2396038768|gb|ON812661.1| | 1955172 | g444905 | i0 | 80.984 | 2.40648379052369 | 305 | 58 | 76 | 0 | 96 | 400 | 4520 | 4216 | MAG: Totiviridae sp. isolate TIGMIC_4, complete genome | blastn | 965 | 243 | 1 | Viruses | Orthornavirae | Duplornaviricota | Chrymotiviricetes | Ghabrivirales | Totiviridae | Totiviridae sp. | |||
| 21091613 | 21091613 | PRJNA704949_P_NODE_1390917_length_211_cov_1.401235_g1375579_i0 | PRJNA704949 | 1390917 | 211 | 1.401235 | 2.95660585 | Chemarfal virus 260 | 3063286 | Viruses | Viruses | 331 | 2.13e-86 | NTclustered | gi|2626079958|gb|OR270550.1| | 3063286 | g1375579 | i0 | 96.078 | 3.75355450236967 | 204 | 6 | 97 | 2 | 7 | 210 | 146 | 347 | MAG: Chemarfal virus 260 isolate ML188 genomic sequence | blastn | 792 | 331 | 1 | Viruses | Orthornavirae | Duplornaviricota | Chrymotiviricetes | Ghabrivirales | Chemarfal virus 260 | ||||
| 22374035 | 22374035 | PRJNA704949_P_NODE_322738_length_475_cov_1.708920_g307845_i0 | PRJNA704949 | 322738 | 475 | 1.70892 | 8.11737 | Malassezia restricta virus MrV40L | 2727863 | Viruses | Viruses | 850 | 0 | NTclustered | gi|1832308141|gb|MN603497.1| | 2727863 | g307845 | i0 | 98.947 | 1.49263157894737 | 475 | 5 | 100 | 0 | 1 | 475 | 3191 | 2717 | Malassezia restricta virus MrV40L, complete genome | blastn | 709 | 850 | 1 | Viruses | Orthornavirae | Duplornaviricota | Chrymotiviricetes | Ghabrivirales | Totiviridae | Malassezia restricta virus MrV40L | |||
| 23649709 | 23649709 | PRJNA704949_P_NODE_31699_length_1403_cov_2.081979_g22473_i0 | PRJNA704949 | 31699 | 1403 | 2.081979 | 29.21016537 | Malassezia restricta virus MrV40L | 2727863 | Viruses | Viruses | 2023 | 0 | NTclustered | gi|1832308141|gb|MN603497.1| | 2727863 | g22473 | i0 | 98.517 | 1.23093371347113 | 1146 | 17 | 99 | 0 | 258 | 1403 | 333 | 1478 | Malassezia restricta virus MrV40L, complete genome | blastn | 1727 | 2023 | 1 | Viruses | Orthornavirae | Duplornaviricota | Chrymotiviricetes | Ghabrivirales | Totiviridae | Malassezia restricta virus MrV40L | |||
| 26988224 | 26988224 | PRJNA704949_P_NODE_42682_length_1176_cov_2.966282_g32547_i0 | PRJNA704949 | 42682 | 1176 | 2.966282 | 34.88347632 | Totivirus sp. | 2776824 | Viruses | Viruses | 501 | 8.259999999999999e-175 | NR | QOQ37361.1 | 2776824 | g32547 | i0 | 72.6 | 0.836734693877551 | 328 | 90 | 83.7 | 0 | 1161 | 178 | 21 | 348 | QOQ37361.1 capsid protein, partial [Totivirus sp.] | diamond | 984 | 501 | 1 | Viruses | Orthornavirae | Duplornaviricota | Chrymotiviricetes | Ghabrivirales | Orthototiviridae | Totivirus | Totivirus sp. | ||
| 27156861 | 27156861 | PRJNA704949_P_NODE_1711002_length_184_cov_1.533333_g1695663_i0 | PRJNA704949 | 1711002 | 184 | 1.533333 | 2.82133272 | Totivirus | 11007 | Viruses | Viruses | 92.4 | 4.01e-20 | NR | QOQ37362.1 | 2776824 | g1695663 | i0 | 73.6 | 1.71195652173913 | 53 | 14 | 86.4 | 0 | 166 | 8 | 111 | 163 | QOQ37362.1 RNA-dependent RNA polymerase, partial [Totivirus sp.] | diamond | 315 | 92.4 | 1 | Viruses | Orthornavirae | Duplornaviricota | Chrymotiviricetes | Ghabrivirales | Orthototiviridae | Totivirus | Totivirus sp. | ||
| 27209620 | 27209620 | PRJNA704949_P_NODE_647602_length_336_cov_1.993031_g632276_i0 | PRJNA704949 | 647602 | 336 | 1.993031 | 6.69658416 | Erysiphe necator associated totivirus 8 | 2737098 | Viruses | Viruses | 75.9 | 2.7e-13 | NR | WAK77400.1 | 2737098 | g632276 | i0 | 48 | 0.669642857142857 | 75 | 39 | 67 | 0 | 336 | 112 | 723 | 797 | WAK77400.1 MAG: polyprotein [Erysiphe necator associated totivirus 8] | diamond | 225 | 75.9 | 1 | Viruses | Orthornavirae | Duplornaviricota | Chrymotiviricetes | Ghabrivirales | Orthototiviridae | Totivirus | Erysiphe necator associated totivirus 8 | ||
| 27620306 | 27620306 | PRJNA704949_P_NODE_1808504_length_177_cov_1.218750_g1793165_i0 | PRJNA704949 | 1808504 | 177 | 1.21875 | 2.1571875 | Fish-associated picorna-like virus 3 | 3003959 | Viruses | Viruses | 58.2 | 5.8e-8 | NR | UNY41988.1 | 3003959 | g1793165 | i0 | 59.3 | 0.915254237288136 | 54 | 16 | 89.8 | 2 | 162 | 4 | 157 | 205 | UNY41988.1 MAG: polyprotein [Picornavirales sp.] | diamond | 162 | 58.2 | 1 | Viruses | Orthornavirae | Pisuviricota | Pisoniviricetes | Picornavirales | Fish-associated picorna-like virus 3 | ||||
| 27841297 | 27841297 | PRJNA704949_P_NODE_614784_length_346_cov_1.400673_g599460_i0 | PRJNA704949 | 614784 | 346 | 1.400673 | 4.84632858 | Scheffersomyces segobiensis virus L | 1300323 | Viruses | Viruses | 101 | 3.54e-22 | NR | YP_009507830.1 | 1300323 | g599460 | i0 | 46.2 | 1.83815028901734 | 106 | 56 | 91 | 1 | 27 | 341 | 226 | 331 | YP_009507830.1 capsid [Scheffersomyces segobiensis virus L] | diamond | 636 | 101 | 1 | Viruses | Orthornavirae | Duplornaviricota | Chrymotiviricetes | Ghabrivirales | Orthototiviridae | Totivirus | Totivirus roku | ||
| 28125358 | 28125358 | PRJNA704949_P_NODE_1679025_length_186_cov_2.379562_g1663686_i0 | PRJNA704949 | 1679025 | 186 | 2.379562 | 4.42598532 | brine shrimp partiti-like virus 3 | 2900390 | Viruses | Viruses | 42.7 | 0.0179 | NR | UNI73913.1 | 2900390 | g1663686 | i0 | 43.8 | 0.774193548387097 | 48 | 25 | 77.4 | 1 | 165 | 22 | 257 | 302 | UNI73913.1 MAG: hypothetical protein [brine shrimp partiti-like virus 3] | diamond | 144 | 42.7 | 1 | Viruses | Orthornavirae | Pisuviricota | Duplopiviricetes | Durnavirales | Partitiviridae | brine shrimp partiti-like virus 3 | |||
| 28662004 | 28662004 | PRJNA704949_P_NODE_1012987_length_258_cov_1.755981_g997652_i0 | PRJNA704949 | 1012987 | 258 | 1.755981 | 4.53043098 | Botourmiaviridae sp. | 2808997 | Viruses | Viruses | 154 | 7.659999999999998e-42 | NR | XFO98461.1 | 2808997 | g997652 | i0 | 82.1 | 0.976744186046512 | 84 | 15 | 97.7 | 0 | 257 | 6 | 433 | 516 | XFO98461.1 RNA-dependent RNA polymerase [Botourmiaviridae sp.] | diamond | 252 | 154 | 1 | Viruses | Orthornavirae | Lenarviricota | Miaviricetes | Ourlivirales | Botourmiaviridae | Botourmiaviridae sp. | |||
| 29482845 | 29482845 | PRJNA704949_P_NODE_1890970_length_171_cov_1.688525_g1875631_i0 | PRJNA704949 | 1890970 | 171 | 1.688525 | 2.88737775 | Geotrichum candidum totivirus 4 | 3075233 | Viruses | Viruses | 44.7 | 0.00293 | NR | WMZ16835.1 | 3075233 | g1875631 | i0 | 41.1 | 0.982456140350877 | 56 | 32 | 96.5 | 1 | 169 | 5 | 68 | 123 | WMZ16835.1 RNA-dependent RNA polymerase [Geotrichum candidum totivirus 4] | diamond | 168 | 44.7 | 1 | Viruses | Orthornavirae | Duplornaviricota | Chrymotiviricetes | Ghabrivirales | Orthototiviridae | Totivirus | Geotrichum candidum totivirus 4 | ||
| 30525722 | 30525722 | PRJNA704949_P_NODE_928413_length_272_cov_2.246637_g913079_i0 | PRJNA704949 | 928413 | 272 | 2.246637 | 6.11085264 | Malassezia restricta associated totivirus 1 | 3048757 | Viruses | Viruses | 103 | 1.5699999999999994e-23 | NR | CAI9858976.1 | 3048757 | g913079 | i0 | 60.7 | 0.981617647058823 | 89 | 35 | 98.2 | 0 | 269 | 3 | 166 | 254 | CAI9858976.1 polyprotein, partial [Malassezia restricta associated totivirus 1] | diamond | 267 | 103 | 1 | Viruses | Orthornavirae | Duplornaviricota | Chrymotiviricetes | Ghabrivirales | Orthototiviridae | Totivirus | Malassezia restricta associated totivirus 1 | ||
| 30694250 | 30694250 | PRJNA704949_P_NODE_1206593_length_231_cov_1.972527_g1191256_i0 | PRJNA704949 | 1206593 | 231 | 1.972527 | 4.55653737 | Ghabrivirales | 2732540 | Viruses | Viruses | 70.5 | 5.27e-12 | NR | WAK77686.1 | 1955172 | g1191256 | i0 | 53.6 | 3.62337662337662 | 69 | 29 | 85.7 | 2 | 214 | 17 | 479 | 547 | WAK77686.1 MAG: capsid protein [Totiviridae sp.] | diamond | 837 | 70.9 | 0.994358251057828 | Viruses | Orthornavirae | Duplornaviricota | Chrymotiviricetes | Ghabrivirales | Totiviridae | Totiviridae sp. | |||
| 30883898 | 30883898 | PRJNA704949_P_NODE_2185974_length_160_cov_2.765766_g2170635_i0 | PRJNA704949 | 2185974 | 160 | 2.765766 | 4.4252256 | Totivirus | 11007 | Viruses | Viruses | 80.1 | 7.52e-16 | NR | QOQ37362.1 | 2776824 | g2170635 | i0 | 73.6 | 1.9875 | 53 | 14 | 99.4 | 0 | 159 | 1 | 187 | 239 | QOQ37362.1 RNA-dependent RNA polymerase, partial [Totivirus sp.] | diamond | 318 | 80.9 | 0.990111248454882 | Viruses | Orthornavirae | Duplornaviricota | Chrymotiviricetes | Ghabrivirales | Orthototiviridae | Totivirus | Totivirus sp. | ||
| 31283761 | 31283761 | PRJNA704949_P_NODE_1896695_length_171_cov_1.278689_g1881356_i0 | PRJNA704949 | 1896695 | 171 | 1.278689 | 2.18655819 | Totiviridae sp. | 1955172 | Viruses | Viruses | 63.9 | 4.62e-10 | NR | WAK77450.1 | 1955172 | g1881356 | i0 | 65.2 | 0.807017543859649 | 46 | 16 | 80.7 | 0 | 140 | 3 | 262 | 307 | WAK77450.1 MAG: capsid protein [Totiviridae sp.] | diamond | 138 | 63.9 | 1 | Viruses | Orthornavirae | Duplornaviricota | Chrymotiviricetes | Ghabrivirales | Totiviridae | Totiviridae sp. | |||
| 31884832 | 31884832 | PRJNA704949_P_NODE_29057_length_1484_cov_2.907317_g20164_i0 | PRJNA704949 | 29057 | 1484 | 2.907317 | 43.14458428 | Totiviridae sp. | 1955172 | Viruses | Viruses | 306 | 9.26e-93 | NR | WAK77569.1 | 1955172 | g20164 | i0 | 38.3 | 1.9588948787062 | 486 | 283 | 96.4 | 6 | 1436 | 6 | 1 | 478 | WAK77569.1 MAG: capsid protein [Totiviridae sp.] | diamond | 2907 | 306 | 1 | Viruses | Orthornavirae | Duplornaviricota | Chrymotiviricetes | Ghabrivirales | Totiviridae | Totiviridae sp. | |||
| 32612670 | 32612670 | PRJNA704949_P_NODE_983480_length_263_cov_1.457944_g968145_i0 | PRJNA704949 | 983480 | 263 | 1.457944 | 3.83439272 | Cryphonectria hypovirus 2 | 40282 | Viruses | Viruses | 50.1 | 1.3e-4 | NR | NP_613266.1 | 40282 | g968145 | i0 | 45.5 | 0.501901140684411 | 44 | 24 | 50.2 | 0 | 260 | 129 | 2683 | 2726 | NP_613266.1 polyprotein [Cryphonectria hypovirus 2] | diamond | 132 | 50.1 | 1 | Viruses | Orthornavirae | Pisuviricota | Duplopiviricetes | Durnavirales | Hypoviridae | Alphahypovirus | Alphahypovirus americanum | ||
| 32706840 | 32706840 | PRJNA704949_P_NODE_32380_length_1383_cov_5.925037_g23075_i0 | PRJNA704949 | 32380 | 1383 | 5.925037 | 81.94326171 | Totivirus sp. | 2776824 | Viruses | Viruses | 454 | 7.579999999999998e-157 | NR | QOQ37363.1 | 2776824 | g23075 | i0 | 88.8 | 0.544468546637744 | 251 | 28 | 54.4 | 0 | 456 | 1208 | 1 | 251 | QOQ37363.1 RNA-dependent RNA polymerase, partial [Totivirus sp.] | diamond | 753 | 454 | 1 | Viruses | Orthornavirae | Duplornaviricota | Chrymotiviricetes | Ghabrivirales | Orthototiviridae | Totivirus | Totivirus sp. |
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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;