RNAquarium Metadata Server
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contig_metadata

1 row where bioproject = "PRJNA704949", tax_kingdom = "Methanobacteriati" and tax_phylum = "Candidatus Hydrothermarchaeota"

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tax_superkingdom 1

tax_phylum 1

  • Candidatus Hydrothermarchaeota · 1 ✖

tax_kingdom 1

  • Methanobacteriati · 1 ✖

bioproject 1

  • PRJNA704949 · 1 ✖

analysis 1

tax_clade 0

Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
29640717 29640717 PRJNA704949_P_NODE_281250_length_505_cov_2.473684_g266541_i0 PRJNA704949 281250 505 2.473684 12.4921042 Candidatus Hydrothermarchaeaceae archaeon 3107143 Archaea Archaea 56.2 1.12e-6   NR MEE9564908.1 3107143 g266541 i0 35.4 0.487128712871287 82 53 48.7 0 127 372 3 84 MEE9564908.1 SpoVG family protein [Candidatus Hydrothermarchaeaceae archaeon] diamond 246 56.2 1 Archaea   Methanobacteriati Candidatus Hydrothermarchaeota Candidatus Hydrothermarchaeia Candidatus Hydrothermarchaeales Candidatus Hydrothermarchaeaceae   Candidatus Hydrothermarchaeaceae archaeon

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;