RNAquarium Metadata Server
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contig_metadata

4 rows where bioproject = "PRJNA704949", tax_kingdom = "Fungi" and tax_phylum = "Blastocladiomycota"

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tax_superkingdom 1

tax_phylum 1

  • Blastocladiomycota · 4 ✖

tax_kingdom 1

  • Fungi · 4 ✖

tax_clade 1

bioproject 1

  • PRJNA704949 · 4 ✖

analysis 1

Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
29714680 29714680 PRJNA704949_P_NODE_961190_length_267_cov_0.954128_g945855_i0 PRJNA704949 961190 267 0.954128 2.54752176 root 1 Root_unresolved Root_unresolved 51.6 2.08e-5   NR KAJ1501146.1 945690 g945855 i0 42.6 1.50561797752809 47 27 52.8 0 100 240 9 55 KAJ1501146.1 hypothetical protein HMI54_010222 [Coelomomyces lativittatus] diamond 402 51.6 1 Eukaryota Opisthokonta Fungi Blastocladiomycota Blastocladiomycetes Blastocladiales Coelomomycetaceae Coelomomyces Coelomomyces lativittatus
30936377 30936377 PRJNA704949_P_NODE_1992894_length_167_cov_1.322034_g1977555_i0 PRJNA704949 1992894 167 1.322034 2.20779678 Paraphysoderma sedebokerense 1500003 Fungi Fungi 62.4 1.54e-9   NR KAI9139273.1 1500003 g1977555 i0 50.9 2.76646706586826 53 26 95.2 0 7 165 144 196 KAI9139273.1 hypothetical protein BKA69DRAFT_1040286 [Paraphysoderma sedebokerense] diamond 462 62.4 1 Eukaryota Opisthokonta Fungi Blastocladiomycota Physodermatomycetes Physodermatales Physodermataceae Paraphysoderma Paraphysoderma sedebokerense
31442218 31442218 PRJNA704949_P_NODE_685416_length_326_cov_1.126354_g670088_i0 PRJNA704949 685416 326 1.126354 3.67191404 Allomyces macrogynus ATCC 38327 578462 Fungi Fungi 114 7.57e-27   NR KNE62319.1 578462 g670088 i0 61.9 3.69938650306748 97 35 89.3 1 13 303 408 502 KNE62319.1 hypothetical protein AMAG_18849 [Allomyces macrogynus ATCC 38327] diamond 1206 114 1 Eukaryota Opisthokonta Fungi Blastocladiomycota Blastocladiomycetes Blastocladiales Blastocladiaceae Allomyces Allomyces macrogynus
32895336 32895336 PRJNA704949_P_NODE_1122860_length_242_cov_1.616580_g1107524_i0 PRJNA704949 1122860 242 1.61658 3.9121236 Blastocladiella britannica 64508 Fungi Fungi 44.7 0.00778   NR KAI9224399.1 64508 g1107524 i0 41.7 0.743801652892562 60 33 74.4 2 7 186 730 787 KAI9224399.1 Sodium/calcium exchanger protein-domain-containing protein [Blastocladiella britannica] diamond 180 44.7 1 Eukaryota Opisthokonta Fungi Blastocladiomycota Blastocladiomycetes Blastocladiales Blastocladiaceae Blastocladiella Blastocladiella britannica

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;