RNAquarium Metadata Server
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contig_metadata

1 row where bioproject = "PRJNA704949", tax_clade = "PVC group" and tax_phylum = "Candidatus Auribacterota"

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tax_superkingdom 1

tax_phylum 1

  • Candidatus Auribacterota · 1 ✖

tax_kingdom 1

tax_clade 1

  • PVC group · 1 ✖

bioproject 1

  • PRJNA704949 · 1 ✖

analysis 1

Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
30778408 30778408 PRJNA704949_P_NODE_280034_length_506_cov_2.433260_g265331_i0 PRJNA704949 280034 506 2.43326 12.3122956 Candidatus Auribacter fodinae 2093366 Bacteria Bacteria 55.1 2.99e-5   NR RJP59614.1 2093366 g265331 i0 43.5 1.0197628458498 92 40 47.4 3 502 263 2025 2116 RJP59614.1 MAG: hypothetical protein C4541_05645, partial [Candidatus Auribacter fodinae] diamond 516 55.1 1 Bacteria PVC group Pseudomonadati Candidatus Auribacterota Candidatus Auribacteria Candidatus Auribacterales Candidatus Auribacteraceae Candidatus Auribacter Candidatus Auribacter fodinae

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;