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contig_metadata

10 rows where bioproject = "PRJNA704949" and tax_clade = "Methanomada group"

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analysis 2

tax_superkingdom 1

tax_phylum 1

tax_kingdom 1

tax_clade 1

  • Methanomada group · 10 ✖

bioproject 1

  • PRJNA704949 · 10 ✖
Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
7069855 7069855 PRJNA704949_P_NODE_1655266_length_188_cov_1.805755_g1639927_i0 PRJNA704949 1655266 188 1.805755 3.3948194 Methanobrevibacter arboriphilus 39441 Archaea Archaea 52.8 0.016   NTclustered gi|2047640843|dbj|AP019779.1| 39441 g1639927 i0 100 0.148936170212766 28 0 15 0 50 77 2217414 2217441 Methanobrevibacter arboriphilus SA DNA, complete genome blastn 28 52.8 1 Archaea Methanomada group Methanobacteriati Methanobacteriota Methanobacteria Methanobacteriales Methanobacteriaceae Methanobrevibacter Methanobrevibacter arboriphilus
26619201 26619201 PRJNA704949_P_NODE_1982981_length_167_cov_2.118644_g1967642_i0 PRJNA704949 1982981 167 2.118644 3.5381354800000002 Candidatus Methanovirga 3110797 Archaea Archaea 63.9 4.39e-10   NR MDR2624669.1 3110952 g1967642 i0 62.2 1.61676646706587 45 17 80.8 0 29 163 120 164 MDR2624669.1 glutamate decarboxylase [Candidatus Methanovirga aequatorialis] diamond 270 63.9 1 Archaea Methanomada group Methanobacteriati Methanobacteriota Methanobacteria Methanobacteriales Methanobacteriaceae Candidatus Methanovirga Candidatus Methanovirga aequatorialis
26650718 26650718 PRJNA704949_P_NODE_969881_length_265_cov_1.810185_g954546_i0 PRJNA704949 969881 265 1.810185 4.79699025 Methanobrevibacter 2172 Archaea Archaea 159 2.04e-46   NR WP_292744972.1 66852 g954546 i0 93.9 3.71320754716981 82 5 92.8 0 1 246 170 251 WP_292744972.1 4-hydroxy-tetrahydrodipicolinate reductase [Methanobrevibacter sp.] diamond 984 160 0.99375 Archaea Methanomada group Methanobacteriati Methanobacteriota Methanobacteria Methanobacteriales Methanobacteriaceae Methanobrevibacter Methanobrevibacter sp.
27156888 27156888 PRJNA704949_P_NODE_1977222_length_168_cov_0.873950_g1961883_i0 PRJNA704949 1977222 168 0.87395 1.468236 root 1 Root_unresolved Root_unresolved 70.9 1.66e-12   NR MBO7734432.1 66852 g1961883 i0 62.7 7.66071428571429 51 19 91.1 0 153 1 36 86 MBO7734432.1 hypothetical protein [Methanobrevibacter sp.] diamond 1287 71.6 0.990223463687151 Archaea Methanomada group Methanobacteriati Methanobacteriota Methanobacteria Methanobacteriales Methanobacteriaceae Methanobrevibacter Methanobrevibacter sp.
27662808 27662808 PRJNA704949_P_NODE_1461784_length_204_cov_1.800000_g1446446_i0 PRJNA704949 1461784 204 1.8 3.672 root 1 Root_unresolved Root_unresolved 45.4 0.00248   NR WP_069585686.1 2160 g1446446 i0 41.1 1.66176470588235 56 33 82.4 0 3 170 169 224 WP_069585686.1 MULTISPECIES: AAA family ATPase [Methanobacterium] diamond 339 45.4 1 Archaea Methanomada group Methanobacteriati Methanobacteriota Methanobacteria Methanobacteriales Methanobacteriaceae Methanobacterium  
28041685 28041685 PRJNA704949_P_NODE_491985_length_388_cov_2.501475_g476734_i0 PRJNA704949 491985 388 2.501475 9.705723 root 1 Root_unresolved Root_unresolved 86.3 1.14e-16   NR MBI5679888.1 2164 g476734 i0 56.5 2.16494845360825 69 29 53.4 1 216 10 317 384 MBI5679888.1 PAS domain S-box protein [Methanobacterium sp.] diamond 840 87 0.991954022988506 Archaea Methanomada group Methanobacteriati Methanobacteriota Methanobacteria Methanobacteriales Methanobacteriaceae Methanobacterium Methanobacterium sp.
28535880 28535880 PRJNA704949_P_NODE_13167_length_2733_cov_4.108420_g7072_i0 PRJNA704949 13167 2733 4.10842 112.2831186 Methanobacterium sp. 2164 Archaea Archaea 139 4.27e-33   NR MEN6291794.1 2164 g7072 i0 40.4 0.217343578485181 198 108 21.2 4 1661 1083 25 217 MEN6291794.1 hypothetical protein [Methanobacterium sp.] diamond 594 139 1 Archaea Methanomada group Methanobacteriati Methanobacteriota Methanobacteria Methanobacteriales Methanobacteriaceae Methanobacterium Methanobacterium sp.
30441775 30441775 PRJNA704949_P_NODE_972993_length_265_cov_0.962963_g957658_i0 PRJNA704949 972993 265 0.962963 2.55185195 root 1 Root_unresolved Root_unresolved 86.7 7.69e-18   NR WP_007044944.1 213185 g957658 i0 59.7 1.66415094339623 72 28 81.5 1 259 44 274 344 WP_007044944.1 GDP-mannose 4,6-dehydratase [Methanotorris formicicus] diamond 441 87.4 0.991990846681922 Archaea Methanomada group Methanobacteriati Methanobacteriota Methanococci Methanococcales Methanocaldococcaceae Methanotorris Methanotorris formicicus
32180591 32180591 PRJNA704949_P_NODE_1925138_length_169_cov_1.300000_g1909799_i0 PRJNA704949 1925138 169 1.3 2.197 Methanobrevibacter 2172 Archaea Archaea 61.2 1.85e-10   NR MEE1156204.1 66852 g1909799 i0 71.9 2.27218934911243 32 9 56.8 0 169 74 62 93 MEE1156204.1 IS200/IS605 family transposase [Methanobrevibacter sp.] diamond 384 61.2 1 Archaea Methanomada group Methanobacteriati Methanobacteriota Methanobacteria Methanobacteriales Methanobacteriaceae Methanobrevibacter Methanobrevibacter sp.
32780489 32780489 PRJNA704949_P_NODE_984300_length_263_cov_1.214953_g968965_i0 PRJNA704949 984300 263 1.214953 3.19532639 Methanobrevibacter 2172 Archaea Archaea 45.8 0.00403   NR WP_330009668.1 66852 g968965 i0 55.3 1.57414448669202 38 17 43.3 0 118 5 270 307 WP_330009668.1 right-handed parallel beta-helix repeat-containing protein [Methanobrevibacter sp.] diamond 414 45.8 1 Archaea Methanomada group Methanobacteriati Methanobacteriota Methanobacteria Methanobacteriales Methanobacteriaceae Methanobrevibacter Methanobrevibacter sp.

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;