RNAquarium Metadata Server
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contig_metadata

9 rows where bioproject = "PRJNA704949", tax_clade = "Metamonada" and tax_superkingdom = "Eukaryota"

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tax_phylum 3

analysis 2

tax_superkingdom 1

  • Eukaryota · 9 ✖

tax_clade 1

  • Metamonada · 9 ✖

bioproject 1

  • PRJNA704949 · 9 ✖

tax_kingdom 0

Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
2463626 2463626 PRJNA704949_P_NODE_2092822_length_164_cov_1.356522_g2077483_i0 PRJNA704949 2092822 164 1.356522 2.22469608 root 1 Root_unresolved Root_unresolved 196 5.98e-46   NTclustered gi|634005687|gb|KF269355.1| 5722 g2077483 i0 88.415 8.71341463414634 164 17 99 2 1 163 2125 1963 Trichomonas vaginalis strain Tor-A cation-transporting E1-E2 ATPase (TVAG_243570) gene, complete cds blastn 1429 196 1 Eukaryota Metamonada   Parabasalia   Trichomonadida Trichomonadidae Trichomonas Trichomonas vaginalis
7066926 7066926 PRJNA704949_P_NODE_1295946_length_221_cov_1.511628_g1280609_i0 PRJNA704949 1295946 221 1.511628 3.34069788 uncultured Oxymonadida sp. 413579 Preaxostyla other_Eukaryota 206 1.42e-48   NTclustered gi|119116878|gb|DQ924975.1| 413579 g1280609 i0 83.636 87.0723981900452 220 34 99 2 3 221 758 976 Unidentified Oxymonadida clone 1 alpha-tubulin (Atub) mRNA, partial cds blastn 19243 206 1 Eukaryota Metamonada   Preaxostyla   Oxymonadida     uncultured Oxymonadida sp.
28093623 28093623 PRJNA704949_P_NODE_1260185_length_225_cov_1.477273_g1244848_i0 PRJNA704949 1260185 225 1.477273 3.32386425 Carpediemonas membranifera 201153 Fornicata other_Eukaryota 55.5 9.86e-7   NR KAG9396374.1 201153 g1244848 i0 57.6 2.41333333333333 59 21 78.7 2 204 28 344 398 KAG9396374.1 Kinesin motor domain [Carpediemonas membranifera] diamond 543 55.5 1 Eukaryota Metamonada   Fornicata       Carpediemonas Carpediemonas membranifera
28693751 28693751 PRJNA704949_P_NODE_1249247_length_226_cov_1.790960_g1233910_i0 PRJNA704949 1249247 226 1.79096 4.0475696 Spironucleus salmonicida 348837 Fornicata other_Eukaryota 55.1 9.75e-7   NR XP_067763698.1 348837 g1233910 i0 48.4 0.849557522123894 64 33 85 0 34 225 133 196 XP_067763698.1 Deoxyribose-phosphate aldolase [Spironucleus salmonicida] diamond 192 55.1 1 Eukaryota Metamonada   Fornicata   Diplomonadida Hexamitidae Spironucleus Spironucleus salmonicida
29388701 29388701 PRJNA704949_P_NODE_439109_length_411_cov_1.574586_g423927_i0 PRJNA704949 439109 411 1.574586 6.47154846 Anaeramoeba ignava 1746090 Root_unresolved Root_unresolved 50.4 3.97e-4   NR KAJ5066968.1 1746090 g423927 i0 25.2 0.868613138686131 119 45 86.9 1 29 385 76 150 KAJ5066968.1 gaba-b receptor [Anaeramoeba ignava] diamond 357 50.4 1 Eukaryota Metamonada         Anaeramoebidae Anaeramoeba Anaeramoeba ignava
29798880 29798880 PRJNA704949_P_NODE_428391_length_416_cov_1.536785_g413226_i0 PRJNA704949 428391 416 1.536785 6.3930256 Anaeramoeba flamelloides 1746091 Root_unresolved Root_unresolved 47.8 0.00369   NR KAJ3437029.1 1746091 g413226 i0 50 0.317307692307692 44 22 31.7 0 31 162 259 302 KAJ3437029.1 nad-dependent protein deacetylase sirtuin-2 [Anaeramoeba flamelloides] diamond 132 47.8 1 Eukaryota Metamonada         Anaeramoebidae Anaeramoeba Anaeramoeba flamelloides
30715232 30715232 PRJNA704949_P_NODE_735274_length_313_cov_1.575758_g719945_i0 PRJNA704949 735274 313 1.575758 4.93212254 Anaeramoeba flamelloides 1746091 Root_unresolved Root_unresolved 43.9 0.0328   NR KAJ3438514.1 1746091 g719945 i0 72.4 0.277955271565495 29 8 27.8 0 119 33 724 752 KAJ3438514.1 hypothetical protein M0812_17703 [Anaeramoeba flamelloides] diamond 87 43.9 1 Eukaryota Metamonada         Anaeramoebidae Anaeramoeba Anaeramoeba flamelloides
31853051 31853051 PRJNA704949_P_NODE_1840337_length_175_cov_1.071429_g1824998_i0 PRJNA704949 1840337 175 1.071429 1.87500075 Histomonas meleagridis 135588 Parabasalia other_Eukaryota 68.6 8.9e-12   NR XP_067778871.1 135588 g1824998 i0 58.2 0.942857142857143 55 23 94.3 0 11 175 50 104 XP_067778871.1 dTDP-4-dehydrorhamnose 3,5-epimerase [Histomonas meleagridis] diamond 165 68.6 1 Eukaryota Metamonada   Parabasalia   Tritrichomonadida Dientamoebidae Histomonas Histomonas meleagridis
32832615 32832615 PRJNA704949_P_NODE_1421440_length_208_cov_1.433962_g1406102_i0 PRJNA704949 1421440 208 1.433962 2.98264096 Paratrimastix pyriformis 342808 Preaxostyla other_Eukaryota 75.5 6.46e-14   NR KAJ4461998.1 342808 g1406102 i0 62.1 1.77403846153846 58 21 83.7 1 33 206 245 301 KAJ4461998.1 putative Glycoside hydrolase [Paratrimastix pyriformis] diamond 369 75.5 1 Eukaryota Metamonada   Preaxostyla     Paratrimastigidae Paratrimastix Paratrimastix pyriformis

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;