RNAquarium Metadata Server
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contig_metadata

1 row where bioproject = "PRJNA704949" and tax_clade = "CRESS viruses"

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tax_superkingdom 1

tax_phylum 1

tax_kingdom 1

tax_clade 1

  • CRESS viruses · 1 ✖

bioproject 1

  • PRJNA704949 · 1 ✖

analysis 1

Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
20311972 20311972 PRJNA704949_P_NODE_1119416_length_243_cov_0.948454_g1104080_i0 PRJNA704949 1119416 243 0.948454 2.30474322 Viruses 10239 Viruses Viruses 416 6.739999999999998e-112   NTclustered gi|1848664582|gb|MN891788.1| 2740165 g1104080 i0 100 2.77777777777778 225 0 93 0 19 243 116 340 Brassica caulorapa CRESS virus strain pt079-cirl-1, complete genome blastn 675 416 1 Viruses CRESS viruses Shotokuvirae Cressdnaviricota         Brassica caulorapa CRESS virus

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;