RNAquarium Metadata Server
Institute Website Terms of Use Privacy Policy

contig_metadata

23 rows where bioproject = "PRJNA704949", tax_clade = "Amoebozoa" and tax_phylum = "Discosea"

✎ View and edit SQL

This data as json, CSV (advanced)

analysis 2

tax_superkingdom 1

tax_phylum 1

  • Discosea · 23 ✖

tax_clade 1

  • Amoebozoa · 23 ✖

bioproject 1

  • PRJNA704949 · 23 ✖

tax_kingdom 0

Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
9629609 9629609 PRJNA704949_P_NODE_811588_length_295_cov_2.349593_g796256_i0 PRJNA704949 811588 295 2.349593 6.93129935 Acanthamoeba castellanii 5755 Discosea other_Eukaryota 174 5.6e-39   NTclustered gi|470399466|ref|XM_004335372.1| 1257118 g796256 i0 94.017 0.711864406779661 117 4 71 3 7 122 418 532 Acanthamoeba castellanii str. Neff Ser/Thr phosphatase family superfamily protein (ACA1_244070), partial mRNA blastn 210 174 1 Eukaryota Amoebozoa   Discosea   Longamoebia Acanthamoebidae Acanthamoeba Acanthamoeba castellanii
12168536 12168536 PRJNA704949_P_NODE_1400450_length_210_cov_1.503106_g1385112_i0 PRJNA704949 1400450 210 1.503106 3.1565226 Acanthamoeba castellanii 5755 Discosea other_Eukaryota 270 4.6699999999999986e-68   NTclustered gi|470484649|ref|XM_004344039.1| 1257118 g1385112 i0 90 43.4619047619048 210 19 99 2 2 210 5362 5570 Acanthamoeba castellanii str. Neff PremRNA processing splicing factor 8, putative (ACA1_054320), partial mRNA blastn 9127 270 1 Eukaryota Amoebozoa   Discosea   Longamoebia Acanthamoebidae Acanthamoeba Acanthamoeba castellanii
17266861 17266861 PRJNA704949_P_NODE_135674_length_690_cov_1.811232_g122471_i0 PRJNA704949 135674 690 1.811232 12.4975008 Acanthamoeba castellanii str. Neff 1257118 Discosea other_Eukaryota 76.3 6.33e-12   NR XP_004334106.1 1257118 g122471 i0 54.9 0.308695652173913 71 28 30.4 3 456 665 6 73 XP_004334106.1 ubiquitin carboxyl-terminal hydrolase [Acanthamoeba castellanii str. Neff] diamond 213 76.3 1 Eukaryota Amoebozoa   Discosea   Longamoebia Acanthamoebidae Acanthamoeba Acanthamoeba castellanii
17272658 17272658 PRJNA704949_P_NODE_2097114_length_164_cov_0.904348_g2081775_i0 PRJNA704949 2097114 164 0.904348 1.48313072 Acanthamoeba castellanii 5755 Discosea other_Eukaryota 52.8 0.014   NTclustered gi|470425758|ref|XM_004337790.1| 1257118 g2081775 i0 100 0.170731707317073 28 0 17 0 15 42 878 905 Acanthamoeba castellanii str. Neff chondroitin AC lyase (ACA1_079200), partial mRNA blastn 28 52.8 1 Eukaryota Amoebozoa   Discosea   Longamoebia Acanthamoebidae Acanthamoeba Acanthamoeba castellanii
19815920 19815920 PRJNA704949_P_NODE_1376956_length_212_cov_2.306748_g1361618_i0 PRJNA704949 1376956 212 2.306748 4.89030576 Acanthamoeba castellanii 5755 Discosea other_Eukaryota 52.8 0.019   NTclustered gi|470494147|ref|XM_004346550.1| 1257118 g1361618 i0 100 0.132075471698113 28 0 13 0 84 111 374 347 Acanthamoeba castellanii str. Neff uncharacterized protein (ACA1_230300), partial mRNA blastn 28 52.8 1 Eukaryota Amoebozoa   Discosea   Longamoebia Acanthamoebidae Acanthamoeba Acanthamoeba castellanii
21591607 21591607 PRJNA704949_P_NODE_446117_length_408_cov_1.158774_g430926_i0 PRJNA704949 446117 408 1.158774 4.72779792 Acanthamoeba castellanii str. Neff 1257118 Discosea other_Eukaryota 196 6.099999999999999e-55   NR XP_004339308.1 1257118 g430926 i0 76.7 0.948529411764706 129 30 94.9 0 406 20 968 1096 XP_004339308.1 U5 small nuclear ribonucleoprotein helicase, putative [Acanthamoeba castellanii str. Neff] diamond 387 196 1 Eukaryota Amoebozoa   Discosea   Longamoebia Acanthamoebidae Acanthamoeba Acanthamoeba castellanii
23643362 23643362 PRJNA704949_P_NODE_1535879_length_198_cov_1.046980_g1520540_i0 PRJNA704949 1535879 198 1.04698 2.0730204 Acanthamoeba castellanii 5755 Discosea other_Eukaryota 65.8 2.2e-6   NTclustered gi|470467005|ref|XM_004341715.1| 1257118 g1520540 i0 87.719 0.287878787878788 57 5 28 2 14 69 104 49 Acanthamoeba castellanii str. Neff TolAlike protein (ACA1_199540), partial mRNA blastn 57 65.8 1 Eukaryota Amoebozoa   Discosea   Longamoebia Acanthamoebidae Acanthamoeba Acanthamoeba castellanii
26608457 26608457 PRJNA704949_P_NODE_930381_length_272_cov_1.582960_g915047_i0 PRJNA704949 930381 272 1.58296 4.3056512 Acanthamoeba castellanii str. Neff 1257118 Discosea other_Eukaryota 60.8 1.86e-8   NR XP_004334828.1 1257118 g915047 i0 42.2 1.91911764705882 90 46 97.1 2 9 272 169 254 XP_004334828.1 phospholipase/carboxylesterase [Acanthamoeba castellanii str. Neff] diamond 522 60.8 1 Eukaryota Amoebozoa   Discosea   Longamoebia Acanthamoebidae Acanthamoeba Acanthamoeba castellanii
26734736 26734736 PRJNA704949_P_NODE_420821_length_419_cov_2.821622_g405666_i0 PRJNA704949 420821 419 2.821622 11.82259618 Acanthamoeba castellanii str. Neff 1257118 Discosea other_Eukaryota 132 3.6899999999999996e-34   NR XP_004338672.1 1257118 g405666 i0 51.3 0.837708830548926 117 57 83.8 0 21 371 188 304 XP_004338672.1 uncharacterized protein ACA1_089060 [Acanthamoeba castellanii str. Neff] diamond 351 132 1 Eukaryota Amoebozoa   Discosea   Longamoebia Acanthamoebidae Acanthamoeba Acanthamoeba castellanii
28220039 28220039 PRJNA704949_P_NODE_228686_length_553_cov_2.712302_g214298_i0 PRJNA704949 228686 553 2.712302 14.99903006 Acanthamoeba castellanii str. Neff 1257118 Discosea other_Eukaryota 62 1.21e-7   NR XP_004338419.1 1257118 g214298 i0 41.3 0.802893309222423 75 44 40.7 0 20 244 263 337 XP_004338419.1 uncharacterized protein ACA1_352500 [Acanthamoeba castellanii str. Neff] diamond 444 62 1 Eukaryota Amoebozoa   Discosea   Longamoebia Acanthamoebidae Acanthamoeba Acanthamoeba castellanii
29199291 29199291 PRJNA704949_P_NODE_486069_length_391_cov_1.298246_g470831_i0 PRJNA704949 486069 391 1.298246 5.07614186 Acanthamoeba castellanii str. Neff 1257118 Discosea other_Eukaryota 46.6 0.00832   NR XP_004336960.1 1257118 g470831 i0 35 1.28132992327366 60 39 46 0 375 196 527 586 XP_004336960.1 dedicator of cytokinesis 6, putative [Acanthamoeba castellanii str. Neff] diamond 501 46.6 1 Eukaryota Amoebozoa   Discosea   Longamoebia Acanthamoebidae Acanthamoeba Acanthamoeba castellanii
29514282 29514282 PRJNA704949_P_NODE_1294670_length_221_cov_1.790698_g1279333_i0 PRJNA704949 1294670 221 1.790698 3.95744258 Acanthamoeba castellanii str. Neff 1257118 Discosea other_Eukaryota 55.1 1.02e-6   NR XP_004344777.1 1257118 g1279333 i0 39.3 1.57466063348416 61 36 81.4 1 181 2 170 230 XP_004344777.1 Hypothetical protein ACA1_281280 [Acanthamoeba castellanii str. Neff] diamond 348 55.1 1 Eukaryota Amoebozoa   Discosea   Longamoebia Acanthamoebidae Acanthamoeba Acanthamoeba castellanii
29767304 29767304 PRJNA704949_P_NODE_478391_length_394_cov_1.507246_g463159_i0 PRJNA704949 478391 394 1.507246 5.93854924 Acanthamoeba castellanii str. Neff 1257118 Discosea other_Eukaryota 82.8 1.9e-15   NR XP_004341947.1 1257118 g463159 i0 61 0.921319796954315 59 23 44.9 0 392 216 627 685 XP_004341947.1 gelation factor, putative [Acanthamoeba castellanii str. Neff] diamond 363 82.8 1 Eukaryota Amoebozoa   Discosea   Longamoebia Acanthamoebidae Acanthamoeba Acanthamoeba castellanii
30399806 30399806 PRJNA704949_P_NODE_669473_length_330_cov_1.665480_g654145_i0 PRJNA704949 669473 330 1.66548 5.496084 Acanthamoeba castellanii str. Neff 1257118 Discosea other_Eukaryota 53.9 3.8e-6   NR XP_004334639.1 1257118 g654145 i0 44 0.763636363636364 84 40 73.6 3 245 3 14 93 XP_004334639.1 uncharacterized protein ACA1_091360 [Acanthamoeba castellanii str. Neff] diamond 252 53.9 1 Eukaryota Amoebozoa   Discosea   Longamoebia Acanthamoebidae Acanthamoeba Acanthamoeba castellanii
30872967 30872967 PRJNA704949_P_NODE_1856594_length_173_cov_2.516129_g1841255_i0 PRJNA704949 1856594 173 2.516129 4.35290317 Acanthamoeba castellanii str. Neff 1257118 Discosea other_Eukaryota 60.1 2.3e-10   NR XP_004340849.1 1257118 g1841255 i0 77.8 1.23121387283237 36 8 62.4 0 151 44 18 53 XP_004340849.1 uncharacterized protein ACA1_150550 [Acanthamoeba castellanii str. Neff] diamond 213 60.1 1 Eukaryota Amoebozoa   Discosea   Longamoebia Acanthamoebidae Acanthamoeba Acanthamoeba castellanii
31156798 31156798 PRJNA704949_P_NODE_1147175_length_239_cov_1.294737_g1131839_i0 PRJNA704949 1147175 239 1.294737 3.09442143 Acanthamoeba castellanii str. Neff 1257118 Discosea other_Eukaryota 82.8 2.72e-16   NR XP_004341054.1 1257118 g1131839 i0 54.2 1.0418410041841 83 34 99.2 2 238 2 423 505 XP_004341054.1 uncharacterized protein ACA1_234280 [Acanthamoeba castellanii str. Neff] diamond 249 82.8 1 Eukaryota Amoebozoa   Discosea   Longamoebia Acanthamoebidae Acanthamoeba Acanthamoeba castellanii
31220069 31220069 PRJNA704949_P_NODE_1306615_length_220_cov_1.216374_g1291278_i0 PRJNA704949 1306615 220 1.216374 2.6760228 Acanthamoeba castellanii str. Neff 1257118 Discosea other_Eukaryota 108 1.87e-25   NR XP_004348714.1 1257118 g1291278 i0 76.6 0.872727272727273 64 15 87.3 0 193 2 349 412 XP_004348714.1 glutaminase GtaA, putative [Acanthamoeba castellanii str. Neff] diamond 192 108 1 Eukaryota Amoebozoa   Discosea   Longamoebia Acanthamoebidae Acanthamoeba Acanthamoeba castellanii
31441753 31441753 PRJNA704949_P_NODE_128616_length_705_cov_3.782012_g115532_i0 PRJNA704949 128616 705 3.782012 26.6631846 Acanthamoeba castellanii str. Neff 1257118 Discosea other_Eukaryota 75.9 7.83e-12   NR XP_004334153.1 1257118 g115532 i0 33.5 0.697872340425532 164 104 69.4 3 701 213 74 233 XP_004334153.1 uncharacterized protein ACA1_140250 [Acanthamoeba castellanii str. Neff] diamond 492 75.9 1 Eukaryota Amoebozoa   Discosea   Longamoebia Acanthamoebidae Acanthamoeba Acanthamoeba castellanii
31442125 31442125 PRJNA704949_P_NODE_415916_length_422_cov_1.372654_g400776_i0 PRJNA704949 415916 422 1.372654 5.79259988 Acanthamoeba castellanii str. Neff 1257118 Discosea other_Eukaryota 45.4 0.0296   NR XP_004351637.1 1257118 g400776 i0 34.5 0.618483412322275 87 53 59.7 2 403 152 523 608 XP_004351637.1 regulator of chromosome condensation (RCC1) repeat domain containing protein [Acanthamoeba castellanii str. Neff] diamond 261 45.4 1 Eukaryota Amoebozoa   Discosea   Longamoebia Acanthamoebidae Acanthamoeba Acanthamoeba castellanii
32106445 32106445 PRJNA704949_P_NODE_426578_length_417_cov_1.168478_g411417_i0 PRJNA704949 426578 417 1.168478 4.87255326 Acanthamoeba castellanii str. Neff 1257118 Discosea other_Eukaryota 135 6.69e-34   NR XP_004340668.1 1257118 g411417 i0 56.3 0.971223021582734 135 56 97.1 2 417 13 304 435 XP_004340668.1 inorganic anion transporter, sulfate permease (SulP) subfamily protein [Acanthamoeba castellanii str. Neff] diamond 405 135 1 Eukaryota Amoebozoa   Discosea   Longamoebia Acanthamoebidae Acanthamoeba Acanthamoeba castellanii
32359563 32359563 PRJNA704949_P_NODE_1382059_length_212_cov_1.276074_g1366721_i0 PRJNA704949 1382059 212 1.276074 2.70527688 Acanthamoeba castellanii str. Neff 1257118 Discosea other_Eukaryota 74.3 1.8e-13   NR XP_004337905.1 1257118 g1366721 i0 59.7 1.75471698113208 62 23 84.9 2 28 207 368 429 XP_004337905.1 IPT/TIG domain containing protein [Acanthamoeba castellanii str. Neff] diamond 372 74.3 1 Eukaryota Amoebozoa   Discosea   Longamoebia Acanthamoebidae Acanthamoeba Acanthamoeba castellanii
32454372 32454372 PRJNA704949_P_NODE_1138499_length_240_cov_1.486911_g1123163_i0 PRJNA704949 1138499 240 1.486911 3.5685864 Acanthamoeba castellanii str. Neff 1257118 Discosea other_Eukaryota 55.5 3.45e-7   NR XP_004335739.1 1257118 g1123163 i0 61.1 1.425 36 14 45 0 109 216 5 40 XP_004335739.1 uncharacterized protein ACA1_305560 [Acanthamoeba castellanii str. Neff] diamond 342 55.5 1 Eukaryota Amoebozoa   Discosea   Longamoebia Acanthamoebidae Acanthamoeba Acanthamoeba castellanii
32895306 32895306 PRJNA704949_P_NODE_1054680_length_252_cov_1.280788_g1039344_i0 PRJNA704949 1054680 252 1.280788 3.22758576 Acanthamoeba castellanii str. Neff 1257118 Discosea other_Eukaryota 52.8 1.24e-5   NR XP_004334386.1 1257118 g1039344 i0 45.3 0.630952380952381 53 29 63.1 0 16 174 482 534 XP_004334386.1 transporter, major facilitator subfamily protein [Acanthamoeba castellanii str. Neff] diamond 159 52.8 1 Eukaryota Amoebozoa   Discosea   Longamoebia Acanthamoebidae Acanthamoeba Acanthamoeba castellanii

Advanced export

JSON shape: default, array, newline-delimited

CSV options: 

CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;