RNAquarium Metadata Server
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contig_metadata

9 rows where bioproject = "PRJNA703759" and tax_phylum = "Negarnaviricota"

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tax_superkingdom 1

tax_phylum 1

  • Negarnaviricota · 9 ✖

tax_kingdom 1

bioproject 1

  • PRJNA703759 · 9 ✖

analysis 1

tax_clade 0

Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
2459953 2459953 PRJNA703759_P_NODE_11422_length_398_cov_3.689231_g10946_i0 PRJNA703759 11422 398 3.689231 14.68313938 Orthorubulavirus 2560195 Viruses Viruses 730 0   NTclustered gi|1540352612|gb|MK117734.1| 2560580 g10946 i0 99.749 97.9773869346734 398 1 100 0 1 398 209 606 Mammalian orthorubulavirus 5 isolate XJ-WLMQ fusion protein mRNA, complete cds blastn 38995 736 0.991847826086957 Viruses   Orthornavirae Negarnaviricota Monjiviricetes Mononegavirales Paramyxoviridae Orthorubulavirus Orthorubulavirus mammalis
3736581 3736581 PRJNA703759_P_NODE_21943_length_298_cov_6.373333_g21467_i0 PRJNA703759 21943 298 6.373333 18.99253234 Orthorubulavirus 2560195 Viruses Viruses 551 2.239999999999999e-152   NTclustered gi|1806608684|gb|MN604146.1| 2560580 g21467 i0 100 69.4697986577181 298 0 100 0 1 298 6513 6216 Mammalian orthorubulavirus 5 isolate XJ033, complete genome blastn 20702 551 1 Viruses   Orthornavirae Negarnaviricota Monjiviricetes Mononegavirales Paramyxoviridae Orthorubulavirus Orthorubulavirus mammalis
11388347 11388347 PRJNA703759_P_NODE_1269_length_1706_cov_14.026944_g902_i0 PRJNA703759 1269 1706 14.026944 239.29966464 Orthorubulavirus 2560195 Viruses Viruses 3149 0   NTclustered gi|1806608684|gb|MN604146.1| 2560580 g902 i0 100 76.274325908558 1705 0 99 0 2 1706 1786 82 Mammalian orthorubulavirus 5 isolate XJ033, complete genome blastn 130124 3149 1 Viruses   Orthornavirae Negarnaviricota Monjiviricetes Mononegavirales Paramyxoviridae Orthorubulavirus Orthorubulavirus mammalis
12664373 12664373 PRJNA703759_P_NODE_3190_length_908_cov_4.374850_g2740_i0 PRJNA703759 3190 908 4.37485 39.723638 Orthorubulavirus 2560195 Viruses Viruses 1661 0   NTclustered gi|1806608684|gb|MN604146.1| 2560580 g2740 i0 99.67 82.3799559471366 908 3 100 0 1 908 7410 8317 Mammalian orthorubulavirus 5 isolate XJ033, complete genome blastn 74801 1672 0.993421052631579 Viruses   Orthornavirae Negarnaviricota Monjiviricetes Mononegavirales Paramyxoviridae Orthorubulavirus Orthorubulavirus mammalis
15213458 15213458 PRJNA703759_P_NODE_2992_length_949_cov_4.079909_g2544_i0 PRJNA703759 2992 949 4.079909 38.71833641 Orthorubulavirus 2560195 Viruses Viruses 1748 0   NTclustered gi|1540352612|gb|MK117734.1| 2560580 g2544 i0 99.895 98 949 1 100 0 1 949 1569 621 Mammalian orthorubulavirus 5 isolate XJ-WLMQ fusion protein mRNA, complete cds blastn 93002 1748 1 Viruses   Orthornavirae Negarnaviricota Monjiviricetes Mononegavirales Paramyxoviridae Orthorubulavirus Orthorubulavirus mammalis
19036852 19036852 PRJNA703759_P_NODE_8615_length_466_cov_3.720102_g8139_i0 PRJNA703759 8615 466 3.720102 17.33567532 Orthorubulavirus 2560195 Viruses Viruses 856 0   NTclustered gi|1806608684|gb|MN604146.1| 2560580 g8139 i0 99.785 83.9785407725322 466 1 100 0 1 466 6816 7281 Mammalian orthorubulavirus 5 isolate XJ033, complete genome blastn 39134 861 0.994192799070848 Viruses   Orthornavirae Negarnaviricota Monjiviricetes Mononegavirales Paramyxoviridae Orthorubulavirus Orthorubulavirus mammalis
22862277 22862277 PRJNA703759_P_NODE_1898_length_1288_cov_14.798354_g1495_i0 PRJNA703759 1898 1288 14.798354 190.60279952 Orthorubulavirus 2560195 Viruses Viruses 2355 0   NTclustered gi|1806608684|gb|MN604146.1| 2560580 g1495 i0 99.689 84.1187888198758 1287 4 99 0 1 1287 1806 3092 Mammalian orthorubulavirus 5 isolate XJ033, complete genome blastn 108345 2366 0.995350803043111 Viruses   Orthornavirae Negarnaviricota Monjiviricetes Mononegavirales Paramyxoviridae Orthorubulavirus Orthorubulavirus mammalis
24136614 24136614 PRJNA703759_P_NODE_26099_length_280_cov_4.565217_g25623_i0 PRJNA703759 26099 280 4.565217 12.7826076 Orthorubulavirus 2560195 Viruses Viruses 486 5.969999999999999e-133   NTclustered gi|1806608684|gb|MN604146.1| 2560580 g25623 i0 99.257 91.3285714285714 269 2 96 0 12 280 4774 4506 Mammalian orthorubulavirus 5 isolate XJ033, complete genome blastn 25572 486 1 Viruses   Orthornavirae Negarnaviricota Monjiviricetes Mononegavirales Paramyxoviridae Orthorubulavirus Orthorubulavirus mammalis
25411336 25411336 PRJNA703759_P_NODE_1680_length_1395_cov_4.999244_g1286_i0 PRJNA703759 1680 1395 4.999244 69.7394538 Orthorubulavirus 2560195 Viruses Viruses 2555 0   NTclustered gi|1806608684|gb|MN604146.1| 2560580 g1286 i0 99.713 69.1519713261649 1396 3 100 1 1 1395 3087 4482 Mammalian orthorubulavirus 5 isolate XJ033, complete genome blastn 96467 2555 1 Viruses   Orthornavirae Negarnaviricota Monjiviricetes Mononegavirales Paramyxoviridae Orthorubulavirus Orthorubulavirus mammalis

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;