RNAquarium Metadata Server
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contig_metadata

3 rows where bioproject = "PRJNA703759" and tax_phylum = "Kiritimatiellota"

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analysis 2

tax_superkingdom 1

tax_phylum 1

  • Kiritimatiellota · 3 ✖

tax_kingdom 1

tax_clade 1

bioproject 1

  • PRJNA703759 · 3 ✖
Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
22362259 22362259 PRJNA703759_P_NODE_9918_length_429_cov_1.418539_g9442_i0 PRJNA703759 9918 429 1.418539 6.08553231 Kiritimatiella glycovorans 1307763 Bacteria Bacteria 291 8.06e-74   NTclustered gi|827038732|gb|CP010904.1| 1307763 g9442 i0 80.101 317.009324009324 397 74 92 5 30 424 587936 588329 Kiritimatiella glycovorans strain L21-Fru-AB chromosome, complete genome blastn 135997 291 1 Bacteria PVC group Pseudomonadati Kiritimatiellota Kiritimatiellia Kiritimatiellales Kiritimatiellaceae Kiritimatiella Kiritimatiella glycovorans
23637324 23637324 PRJNA703759_P_NODE_33339_length_256_cov_1.245902_g32863_i0 PRJNA703759 33339 256 1.245902 3.18950912 Kiritimatiella glycovorans 1307763 Bacteria Bacteria 255 1.65e-63   NTclustered gi|827038732|gb|CP010904.1| 1307763 g32863 i0 87.444 155.89453125 223 26 87 2 33 254 588481 588260 Kiritimatiella glycovorans strain L21-Fru-AB chromosome, complete genome blastn 39909 255 1 Bacteria PVC group Pseudomonadati Kiritimatiellota Kiritimatiellia Kiritimatiellales Kiritimatiellaceae Kiritimatiella Kiritimatiella glycovorans
27903845 27903845 PRJNA703759_P_NODE_33685_length_255_cov_1.230769_g33209_i0 PRJNA703759 33685 255 1.230769 3.13846095 Kiritimatiellales bacterium 2202731 Bacteria Bacteria 74.3 3.22e-13   NR MCF7817191.1 2202731 g33209 i0 48.8 3.95294117647059 84 40 98.8 1 254 3 41 121 MCF7817191.1 carbamoyltransferase HypF [Kiritimatiellales bacterium] diamond 1008 74.3 1 Bacteria PVC group Pseudomonadati Kiritimatiellota Kiritimatiellia Kiritimatiellales     Kiritimatiellales bacterium

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;