RNAquarium Metadata Server
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contig_metadata

2 rows where bioproject = "PRJNA703759" and tax_phylum = "Fidelibacterota"

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tax_superkingdom 1

tax_phylum 1

  • Fidelibacterota · 2 ✖

tax_kingdom 1

tax_clade 1

bioproject 1

  • PRJNA703759 · 2 ✖

analysis 1

Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
29388214 29388214 PRJNA703759_P_NODE_45729_length_245_cov_1.267442_g45253_i0 PRJNA703759 45729 245 1.267442 3.1052329 Fidelibacterota bacterium 2026760 Bacteria Bacteria 83.2 1.45e-16   NR MCF7824263.1 2026760 g45253 i0 56.8 1.99591836734694 81 34 98 1 240 1 27 107 MCF7824263.1 1-deoxy-D-xylulose-5-phosphate reductoisomerase [Fidelibacterota bacterium] diamond 489 83.2 1 Bacteria FCB group Pseudomonadati Fidelibacterota         Fidelibacterota bacterium
31283394 31283394 PRJNA703759_P_NODE_22295_length_297_cov_1.035714_g21819_i0 PRJNA703759 22295 297 1.035714 3.07607058 Fidelibacterota bacterium 2026760 Bacteria Bacteria 81.6 7.98e-16   NR MCJ7801580.1 2026760 g21819 i0 64.7 0.515151515151515 51 18 51.5 0 297 145 204 254 MCJ7801580.1 zinc-ribbon domain-containing protein [Fidelibacterota bacterium] diamond 153 81.6 1 Bacteria FCB group Pseudomonadati Fidelibacterota         Fidelibacterota bacterium

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;