RNAquarium Metadata Server
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contig_metadata

3 rows where bioproject = "PRJNA703759" and tax_phylum = "Candidatus Hydrogenedentota"

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tax_superkingdom 1

tax_phylum 1

  • Candidatus Hydrogenedentota · 3 ✖

tax_kingdom 1

tax_clade 1

bioproject 1

  • PRJNA703759 · 3 ✖

analysis 1

Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
27145564 27145564 PRJNA703759_P_NODE_14342_length_356_cov_1.455830_g13866_i0 PRJNA703759 14342 356 1.45583 5.1827548 Candidatus Hydrogenedentota bacterium 2030809 Bacteria Bacteria 43.1 0.0127   NR MBI4558945.1 2030809 g13866 i0 35.7 0.471910112359551 56 36 47.2 0 187 354 6 61 MBI4558945.1 hypothetical protein [Candidatus Hydrogenedentota bacterium] diamond 168 43.1 1 Bacteria FCB group Pseudomonadati Candidatus Hydrogenedentota         Candidatus Hydrogenedentota bacterium
29135685 29135685 PRJNA703759_P_NODE_36569_length_252_cov_0.871508_g36093_i0 PRJNA703759 36569 252 0.871508 2.19620016 Candidatus Hydrogenedentota bacterium 2030809 Bacteria Bacteria 160 6.959999999999999e-46   NR HPO15690.1 2030809 g36093 i0 78.6 3 84 18 100 0 1 252 24 107 HPO15690.1 prepilin peptidase [Candidatus Hydrogenedentota bacterium] diamond 756 160 1 Bacteria FCB group Pseudomonadati Candidatus Hydrogenedentota         Candidatus Hydrogenedentota bacterium
31030893 31030893 PRJNA703759_P_NODE_13035_length_372_cov_1.618729_g12559_i0 PRJNA703759 13035 372 1.618729 6.02167188 Candidatus Hydrogenedentota bacterium 2030809 Bacteria Bacteria 85.5 5.83e-18   NR HPO14922.1 2030809 g12559 i0 44.7 0.758064516129032 94 52 75.8 0 283 2 9 102 HPO14922.1 hypothetical protein [Candidatus Hydrogenedentota bacterium] diamond 282 85.5 1 Bacteria FCB group Pseudomonadati Candidatus Hydrogenedentota         Candidatus Hydrogenedentota bacterium

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;