RNAquarium Metadata Server
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contig_metadata

2 rows where bioproject = "PRJNA703759", tax_kingdom = "Metazoa" and tax_phylum = "Brachiopoda"

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tax_superkingdom 1

tax_phylum 1

  • Brachiopoda · 2 ✖

tax_kingdom 1

  • Metazoa · 2 ✖

tax_clade 1

bioproject 1

  • PRJNA703759 · 2 ✖

analysis 1

Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
27903822 27903822 PRJNA703759_P_NODE_19865_length_311_cov_0.983193_g19389_i0 PRJNA703759 19865 311 0.983193 3.05773023 Lingula anatina 7574 Brachiopoda other_Eukaryota 52.4 1.66e-5   NR XP_013411109.1 7574 g19389 i0 29.5 1.01286173633441 105 62 95.5 2 308 12 40 138 XP_013411109.1 E3 ubiquitin-protein ligase TRIM32 [Lingula anatina] diamond 315 52.4 1 Eukaryota Opisthokonta Metazoa Brachiopoda Lingulata Lingulida Lingulidae Lingula Lingula anatina
32180528 32180528 PRJNA703759_P_NODE_49298_length_243_cov_0.917647_g48822_i0 PRJNA703759 49298 243 0.917647 2.22988221 Metazoa 33208 Brachiopoda other_Eukaryota 102 5.1099999999999996e-23   NR XP_013391678.1 7574 g48822 i0 52.6 4.81481481481481 78 37 96.3 0 6 239 823 900 XP_013391678.1 echinoderm microtubule-associated protein-like 6 [Lingula anatina] diamond 1170 103 0.990291262135922 Eukaryota Opisthokonta Metazoa Brachiopoda Lingulata Lingulida Lingulidae Lingula Lingula anatina

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;