contig_metadata
27 rows where bioproject = "PRJNA703759" and tax_kingdom = "Fusobacteriati"
This data as json, CSV (advanced)
| Link | rowid ▼ | query | bioproject | node | length | coverage | rel_abundance | taxname_lca | taxid_lca | taxoncategory | taxoncategorysimple | bits | evalue | lowcoverage_flag | analysis_used | target | taxid | gene | allele | pident | sumperc_cov | alnlen | mismatch | qcov | gapopen | qstart | qend | tstart | tend | target_title | analysis | sumalnlen | maxbits | bits_percmax | tax_superkingdom | tax_clade | tax_kingdom | tax_phylum | tax_class | tax_order | tax_family | tax_genus | tax_species |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 684832 | 684832 | PRJNA703759_P_NODE_50761_length_242_cov_0.923077_g50285_i0 | PRJNA703759 | 50761 | 242 | 0.923077 | 2.23384634 | Leptotrichia sp. SK-5 | 3075818 | Bacteria | Bacteria | 150 | 7.509999999999998e-32 | NTclustered | gi|2899356158|dbj|AP028931.1| | 3075818 | g50285 | i0 | 81.771 | 6.62809917355372 | 192 | 23 | 82 | 11 | 13 | 199 | 1530859 | 1530675 | Leptotrichia sp. SK-5 DNA, complete genome | blastn | 1604 | 150 | 1 | Bacteria | Fusobacteriati | Fusobacteriota | Fusobacteriia | Fusobacteriales | Leptotrichiaceae | Leptotrichia | Leptotrichia sp. SK-5 | ||
| 1960610 | 1960610 | PRJNA703759_P_NODE_40462_length_249_cov_0.886364_g39986_i0 | PRJNA703759 | 40462 | 249 | 0.886364 | 2.20704636 | Leptotrichia buccalis | 40542 | Bacteria | Bacteria | 399 | 6.989999999999999e-107 | NTclustered | gi|257048753|gb|CP001685.1| | 523794 | g39986 | i0 | 95.582 | 19.9919678714859 | 249 | 11 | 100 | 0 | 1 | 249 | 640482 | 640730 | Leptotrichia buccalis DSM 1135, complete genome | blastn | 4978 | 399 | 1 | Bacteria | Fusobacteriati | Fusobacteriota | Fusobacteriia | Fusobacteriales | Leptotrichiaceae | Leptotrichia | Leptotrichia buccalis | ||
| 5788081 | 5788081 | PRJNA703759_P_NODE_38285_length_250_cov_1.762712_g37809_i0 | PRJNA703759 | 38285 | 250 | 1.762712 | 4.40678 | Leptotrichia sp. oral taxon 221 | 712362 | Bacteria | Bacteria | 462 | 8.83e-126 | NTclustered | gi|2028889048|gb|CP072378.1| | 712362 | g37809 | i0 | 100 | 1 | 250 | 0 | 100 | 0 | 1 | 250 | 1399705 | 1399954 | Leptotrichia sp. oral taxon 221 strain F0705 chromosome, complete genome | blastn | 250 | 462 | 1 | Bacteria | Fusobacteriati | Fusobacteriota | Fusobacteriia | Fusobacteriales | Leptotrichiaceae | Leptotrichia | Leptotrichia sp. oral taxon 221 | ||
| 7062957 | 7062957 | PRJNA703759_P_NODE_29406_length_269_cov_1.193878_g28930_i0 | PRJNA703759 | 29406 | 269 | 1.193878 | 3.21153182 | Fusobacterium varium | 856 | Bacteria | Bacteria | 54.7 | 0.007 | NTclustered | gi|1243298346|dbj|AP017968.1| | 856 | g28930 | i0 | 94.444 | 0.133828996282528 | 36 | 1 | 13 | 1 | 16 | 51 | 1393353 | 1393387 | Fusobacterium varium Fv113-g1 DNA, complete genome | blastn | 36 | 54.7 | 1 | Bacteria | Fusobacteriati | Fusobacteriota | Fusobacteriia | Fusobacteriales | Fusobacteriaceae | Fusobacterium | Fusobacterium varium | ||
| 7562883 | 7562883 | PRJNA703759_P_NODE_43266_length_247_cov_0.896552_g42790_i0 | PRJNA703759 | 43266 | 247 | 0.896552 | 2.21448344 | Fusobacterium | 848 | Bacteria | Bacteria | 457 | 4.05e-124 | NTclustered | gi|2444100754|gb|CP117525.1| | 851 | g42790 | i0 | 100 | 32.8704453441296 | 247 | 0 | 100 | 0 | 1 | 247 | 1834316 | 1834562 | Fusobacterium nucleatum strain FNV chromosome, complete genome | blastn | 8119 | 457 | 1 | Bacteria | Fusobacteriati | Fusobacteriota | Fusobacteriia | Fusobacteriales | Fusobacteriaceae | Fusobacterium | Fusobacterium nucleatum | ||
| 8337770 | 8337770 | PRJNA703759_P_NODE_38987_length_250_cov_0.881356_g38511_i0 | PRJNA703759 | 38987 | 250 | 0.881356 | 2.20339 | Fusobacterium nucleatum | 851 | Bacteria | Bacteria | 462 | 8.83e-126 | NTclustered | gi|2704983719|gb|CP077132.1| | 851 | g38511 | i0 | 100 | 63.228 | 250 | 0 | 100 | 0 | 1 | 250 | 1103063 | 1102814 | Fusobacterium nucleatum strain KCOM3208 chromosome, complete genome | blastn | 15807 | 462 | 1 | Bacteria | Fusobacteriati | Fusobacteriota | Fusobacteriia | Fusobacteriales | Fusobacteriaceae | Fusobacterium | Fusobacterium nucleatum | ||
| 9613002 | 9613002 | PRJNA703759_P_NODE_34708_length_253_cov_0.866667_g34232_i0 | PRJNA703759 | 34708 | 253 | 0.866667 | 2.19266751 | Leptotrichia sp. oral taxon 212 | 712357 | Bacteria | Bacteria | 418 | 1.9599999999999994e-112 | NTclustered | gi|922689899|gb|CP012410.1| | 712357 | g34232 | i0 | 96.443 | 1 | 253 | 9 | 100 | 0 | 1 | 253 | 2251354 | 2251102 | Leptotrichia sp. oral taxon 212 strain W10393, complete genome | blastn | 253 | 418 | 1 | Bacteria | Fusobacteriati | Fusobacteriota | Fusobacteriia | Fusobacteriales | Leptotrichiaceae | Leptotrichia | Leptotrichia sp. oral taxon 212 | ||
| 9613296 | 9613296 | PRJNA703759_P_NODE_48028_length_244_cov_0.912281_g47552_i0 | PRJNA703759 | 48028 | 244 | 0.912281 | 2.22596564 | Fusobacterium nucleatum | 851 | Bacteria | Bacteria | 451 | 1.86e-122 | NTclustered | gi|2704972056|gb|CP077127.1| | 851 | g47552 | i0 | 100 | 99.8401639344262 | 244 | 0 | 100 | 0 | 1 | 244 | 759303 | 759546 | Fusobacterium nucleatum strain KCOM3503 chromosome, complete genome | blastn | 24361 | 451 | 1 | Bacteria | Fusobacteriati | Fusobacteriota | Fusobacteriia | Fusobacteriales | Fusobacteriaceae | Fusobacterium | Fusobacterium nucleatum | ||
| 10113581 | 10113581 | PRJNA703759_P_NODE_43848_length_247_cov_0.896552_g43372_i0 | PRJNA703759 | 43848 | 247 | 0.896552 | 2.21448344 | Fusobacterium | 848 | Bacteria | Bacteria | 457 | 4.05e-124 | NTclustered | gi|1721134154|emb|LR698955.1| | 851 | g43372 | i0 | 100 | 99.2955465587045 | 247 | 0 | 100 | 0 | 1 | 247 | 23466 | 23220 | Fusobacterium nucleatum isolate MGYG-HGUT-01347 genome assembly, chromosome: 1 | blastn | 24526 | 457 | 1 | Bacteria | Fusobacteriati | Fusobacteriota | Fusobacteriia | Fusobacteriales | Fusobacteriaceae | Fusobacterium | Fusobacterium nucleatum | ||
| 10113614 | 10113614 | PRJNA703759_P_NODE_48888_length_243_cov_0.917647_g48412_i0 | PRJNA703759 | 48888 | 243 | 0.917647 | 2.22988221 | Leptotrichia | 32067 | Bacteria | Bacteria | 390 | 4.089999999999999e-104 | NTclustered | gi|1708566027|dbj|AP019823.1| | 157688 | g48412 | i0 | 95.851 | 8.95061728395062 | 241 | 10 | 99 | 0 | 1 | 241 | 2468471 | 2468231 | Leptotrichia hofstadii JCM16775 DNA, complete genome | blastn | 2175 | 390 | 1 | Bacteria | Fusobacteriati | Fusobacteriota | Fusobacteriia | Fusobacteriales | Leptotrichiaceae | Leptotrichia | Leptotrichia hofstadii | ||
| 10888637 | 10888637 | PRJNA703759_P_NODE_38029_length_251_cov_0.876404_g37553_i0 | PRJNA703759 | 38029 | 251 | 0.876404 | 2.19977404 | Leptotrichia wadei | 157687 | Bacteria | Bacteria | 52.8 | 0.023 | NTclustered | gi|1708575239|dbj|AP019834.1| | 157687 | g37553 | i0 | 100 | 0.111553784860558 | 28 | 0 | 11 | 0 | 195 | 222 | 867022 | 867049 | Leptotrichia wadei JMUB3933 DNA, complete genome | blastn | 28 | 52.8 | 1 | Bacteria | Fusobacteriati | Fusobacteriota | Fusobacteriia | Fusobacteriales | Leptotrichiaceae | Leptotrichia | Leptotrichia wadei | ||
| 12163728 | 12163728 | PRJNA703759_P_NODE_34190_length_253_cov_1.633333_g33714_i0 | PRJNA703759 | 34190 | 253 | 1.633333 | 4.13233249 | Leptotrichia sp. HMT-225 | 3058373 | Bacteria | Bacteria | 446 | 9.01e-121 | NTclustered | gi|2557559843|gb|CP130323.1| | 3058373 | g33714 | i0 | 98.419 | 8.00790513833992 | 253 | 4 | 100 | 0 | 1 | 253 | 2326729 | 2326981 | Leptotrichia sp. HMT-225 chromosome, complete genome | blastn | 2026 | 446 | 1 | Bacteria | Fusobacteriati | Fusobacteriota | Fusobacteriia | Fusobacteriales | Leptotrichiaceae | Leptotrichia | Leptotrichia sp. HMT-225 | ||
| 12163969 | 12163969 | PRJNA703759_P_NODE_45130_length_246_cov_0.901734_g44654_i0 | PRJNA703759 | 45130 | 246 | 0.901734 | 2.21826564 | Leptotrichia sp. oral taxon 212 | 712357 | Bacteria | Bacteria | 366 | 6.99e-97 | NTclustered | gi|922689899|gb|CP012410.1| | 712357 | g44654 | i0 | 93.496 | 1.63008130081301 | 246 | 16 | 100 | 0 | 1 | 246 | 2134389 | 2134634 | Leptotrichia sp. oral taxon 212 strain W10393, complete genome | blastn | 401 | 366 | 1 | Bacteria | Fusobacteriati | Fusobacteriota | Fusobacteriia | Fusobacteriales | Leptotrichiaceae | Leptotrichia | Leptotrichia sp. oral taxon 212 | ||
| 12664467 | 12664467 | PRJNA703759_P_NODE_46150_length_245_cov_0.906977_g45674_i0 | PRJNA703759 | 46150 | 245 | 0.906977 | 2.22209365 | Fusobacterium | 848 | Bacteria | Bacteria | 453 | 5.1900000000000006e-123 | NTclustered | gi|2645857096|gb|CP141275.1| | 76857 | g45674 | i0 | 100 | 100 | 245 | 0 | 100 | 0 | 1 | 245 | 171199 | 170955 | Fusobacterium polymorphum strain NCTC 10562 chromosome, complete genome | blastn | 24500 | 453 | 1 | Bacteria | Fusobacteriati | Fusobacteriota | Fusobacteriia | Fusobacteriales | Fusobacteriaceae | Fusobacterium | Fusobacterium polymorphum | ||
| 13938945 | 13938945 | PRJNA703759_P_NODE_50491_length_242_cov_0.923077_g50015_i0 | PRJNA703759 | 50491 | 242 | 0.923077 | 2.23384634 | Fusobacterium | 848 | Bacteria | Bacteria | 448 | 2.3799999999999995e-121 | NTclustered | gi|2269773925|gb|CP100429.1| | 76857 | g50015 | i0 | 100 | 86.9297520661157 | 242 | 0 | 100 | 0 | 1 | 242 | 2290842 | 2290601 | Fusobacterium polymorphum strain SSMR1 chromosome, complete genome | blastn | 21037 | 448 | 1 | Bacteria | Fusobacteriati | Fusobacteriota | Fusobacteriia | Fusobacteriales | Fusobacteriaceae | Fusobacterium | Fusobacterium polymorphum | ||
| 14713786 | 14713786 | PRJNA703759_P_NODE_50112_length_242_cov_1.846154_g49636_i0 | PRJNA703759 | 50112 | 242 | 1.846154 | 4.46769268 | Fusobacterium polymorphum | 76857 | Bacteria | Bacteria | 442 | 1.1099999999999995e-119 | NTclustered | gi|2706501641|gb|CP084157.1| | 76857 | g49636 | i0 | 99.587 | 484.995867768595 | 242 | 1 | 100 | 0 | 1 | 242 | 2332495 | 2332736 | Fusobacterium polymorphum strain KCOM2446 chromosome, complete genome | blastn | 117369 | 442 | 1 | Bacteria | Fusobacteriati | Fusobacteriota | Fusobacteriia | Fusobacteriales | Fusobacteriaceae | Fusobacterium | Fusobacterium polymorphum | ||
| 15987409 | 15987409 | PRJNA703759_P_NODE_48853_length_243_cov_0.917647_g48377_i0 | PRJNA703759 | 48853 | 243 | 0.917647 | 2.22988221 | Leptotrichia buccalis | 40542 | Bacteria | Bacteria | 444 | 3.09e-120 | NTclustered | gi|257048753|gb|CP001685.1| | 523794 | g48377 | i0 | 99.588 | 9.81481481481481 | 243 | 1 | 100 | 0 | 1 | 243 | 486141 | 486383 | Leptotrichia buccalis DSM 1135, complete genome | blastn | 2385 | 444 | 1 | Bacteria | Fusobacteriati | Fusobacteriota | Fusobacteriia | Fusobacteriales | Leptotrichiaceae | Leptotrichia | Leptotrichia buccalis | ||
| 17262592 | 17262592 | PRJNA703759_P_NODE_40854_length_249_cov_0.886364_g40378_i0 | PRJNA703759 | 40854 | 249 | 0.886364 | 2.20704636 | Fusobacterium polymorphum | 76857 | Bacteria | Bacteria | 455 | 1.47e-123 | NTclustered | gi|1208657894|gb|CP021934.1| | 76857 | g40378 | i0 | 99.598 | 99.6787148594377 | 249 | 1 | 100 | 0 | 1 | 249 | 206912 | 206664 | Fusobacterium nucleatum subsp. polymorphum strain KCOM 1260 (=ChDC F218) genome | blastn | 24820 | 455 | 1 | Bacteria | Fusobacteriati | Fusobacteriota | Fusobacteriia | Fusobacteriales | Fusobacteriaceae | Fusobacterium | Fusobacterium polymorphum | ||
| 17762702 | 17762702 | PRJNA703759_P_NODE_29074_length_270_cov_1.243655_g28598_i0 | PRJNA703759 | 29074 | 270 | 1.243655 | 3.3578685 | Fusobacterium | 848 | Bacteria | Bacteria | 499 | 7.349999999999998e-137 | NTclustered | gi|2706407748|gb|CP077116.1| | 76857 | g28598 | i0 | 100 | 46 | 270 | 0 | 100 | 0 | 1 | 270 | 1715975 | 1716244 | Fusobacterium polymorphum strain KCOM1257 chromosome, complete genome | blastn | 12420 | 499 | 1 | Bacteria | Fusobacteriati | Fusobacteriota | Fusobacteriia | Fusobacteriales | Fusobacteriaceae | Fusobacterium | Fusobacterium polymorphum | ||
| 18536352 | 18536352 | PRJNA703759_P_NODE_38795_length_250_cov_0.881356_g38319_i0 | PRJNA703759 | 38795 | 250 | 0.881356 | 2.20339 | Fusobacterium polymorphum | 76857 | Bacteria | Bacteria | 462 | 8.83e-126 | NTclustered | gi|2078816781|gb|CP071094.1| | 76857 | g38319 | i0 | 100 | 59.752 | 250 | 0 | 100 | 0 | 1 | 250 | 433289 | 433538 | Fusobacterium polymorphum strain THCT15E1 chromosome, complete genome | blastn | 14938 | 462 | 1 | Bacteria | Fusobacteriati | Fusobacteriota | Fusobacteriia | Fusobacteriales | Fusobacteriaceae | Fusobacterium | Fusobacterium polymorphum | ||
| 19811084 | 19811084 | PRJNA703759_P_NODE_21576_length_301_cov_0.951754_g21100_i0 | PRJNA703759 | 21576 | 301 | 0.951754 | 2.86477954 | Leptotrichia buccalis | 40542 | Bacteria | Bacteria | 534 | 2.28e-147 | NTclustered | gi|257048753|gb|CP001685.1| | 523794 | g21100 | i0 | 98.671 | 1.43189368770764 | 301 | 4 | 100 | 0 | 1 | 301 | 1666562 | 1666862 | Leptotrichia buccalis DSM 1135, complete genome | blastn | 431 | 534 | 1 | Bacteria | Fusobacteriati | Fusobacteriota | Fusobacteriia | Fusobacteriales | Leptotrichiaceae | Leptotrichia | Leptotrichia buccalis | ||
| 19811678 | 19811678 | PRJNA703759_P_NODE_47176_length_244_cov_1.409357_g46700_i0 | PRJNA703759 | 47176 | 244 | 1.409357 | 3.43883108 | Leptotrichia shahii | 157691 | Bacteria | Bacteria | 433 | 6.73e-117 | NTclustered | gi|1708568515|dbj|AP019827.1| | 157691 | g46700 | i0 | 98.765 | 1.98360655737705 | 243 | 3 | 99 | 0 | 2 | 244 | 1551458 | 1551216 | Leptotrichia shahii JCM16776 DNA, complete genome | blastn | 484 | 433 | 1 | Bacteria | Fusobacteriati | Fusobacteriota | Fusobacteriia | Fusobacteriales | Leptotrichiaceae | Leptotrichia | Leptotrichia shahii | ||
| 21087278 | 21087278 | PRJNA703759_P_NODE_50817_length_242_cov_0.923077_g50341_i0 | PRJNA703759 | 50817 | 242 | 0.923077 | 2.23384634 | Leptotrichia sp. oral taxon 212 | 712357 | Bacteria | Bacteria | 392 | 1.1299999999999999e-104 | NTclustered | gi|922689899|gb|CP012410.1| | 712357 | g50341 | i0 | 95.868 | 1 | 242 | 10 | 100 | 0 | 1 | 242 | 1663366 | 1663607 | Leptotrichia sp. oral taxon 212 strain W10393, complete genome | blastn | 242 | 392 | 1 | Bacteria | Fusobacteriati | Fusobacteriota | Fusobacteriia | Fusobacteriales | Leptotrichiaceae | Leptotrichia | Leptotrichia sp. oral taxon 212 | ||
| 21587048 | 21587048 | PRJNA703759_P_NODE_19117_length_315_cov_1.776860_g18641_i0 | PRJNA703759 | 19117 | 315 | 1.77686 | 5.597109 | Leptotrichia | 32067 | Bacteria | Bacteria | 52.8 | 0.029 | NTclustered | gi|1708566027|dbj|AP019823.1| | 157688 | g18641 | i0 | 96.774 | 0.187301587301587 | 31 | 1 | 10 | 0 | 66 | 96 | 2527679 | 2527649 | Leptotrichia hofstadii JCM16775 DNA, complete genome | blastn | 59 | 52.8 | 1 | Bacteria | Fusobacteriati | Fusobacteriota | Fusobacteriia | Fusobacteriales | Leptotrichiaceae | Leptotrichia | Leptotrichia hofstadii | ||
| 22361936 | 22361936 | PRJNA703759_P_NODE_44998_length_246_cov_0.901734_g44522_i0 | PRJNA703759 | 44998 | 246 | 0.901734 | 2.21826564 | Fusobacterium nucleatum | 851 | Bacteria | Bacteria | 444 | 3.14e-120 | NTclustered | gi|2705013194|gb|CP084126.1| | 851 | g44522 | i0 | 99.187 | 25.5853658536585 | 246 | 2 | 100 | 0 | 1 | 246 | 1000027 | 999782 | Fusobacterium nucleatum strain KCOM2205 chromosome, complete genome | blastn | 6294 | 444 | 1 | Bacteria | Fusobacteriati | Fusobacteriota | Fusobacteriia | Fusobacteriales | Fusobacteriaceae | Fusobacterium | Fusobacterium nucleatum | ||
| 24911102 | 24911102 | PRJNA703759_P_NODE_47960_length_244_cov_0.912281_g47484_i0 | PRJNA703759 | 47960 | 244 | 0.912281 | 2.22596564 | Fusobacterium pseudoperiodonticum | 2663009 | Bacteria | Bacteria | 435 | 1.87e-117 | NTclustered | gi|1276705688|gb|CP024698.1| | 2663009 | g47484 | i0 | 98.77 | 99.9426229508197 | 244 | 3 | 100 | 0 | 1 | 244 | 701299 | 701056 | Fusobacterium pseudoperiodonticum strain KCOM 1283 chromosome, complete genome | blastn | 24386 | 435 | 1 | Bacteria | Fusobacteriati | Fusobacteriota | Fusobacteriia | Fusobacteriales | Fusobacteriaceae | Fusobacterium | Fusobacterium pseudoperiodonticum | ||
| 28104479 | 28104479 | PRJNA703759_P_NODE_21805_length_299_cov_2.004425_g21329_i0 | PRJNA703759 | 21805 | 299 | 2.004425 | 5.99323075 | FCB group | 1783270 | Bacteria | Bacteria | 96.7 | 8.029999999999999e-24 | NR | MBZ4683857.1 | 2044942 | g21329 | i0 | 61.7 | 2.98996655518395 | 60 | 23 | 60.2 | 0 | 181 | 2 | 1 | 60 | MBZ4683857.1 yidD [Fusobacteriales bacterium] | diamond | 894 | 96.7 | 1 | Bacteria | Fusobacteriati | Fusobacteriota | Fusobacteriia | Fusobacteriales | Fusobacteriales bacterium |
Advanced export
JSON shape: default, array, newline-delimited
CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;