RNAquarium Metadata Server
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contig_metadata

2 rows where bioproject = "PRJNA703759", tax_kingdom = "Fungi" and tax_phylum = "Zoopagomycota"

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tax_superkingdom 1

tax_phylum 1

  • Zoopagomycota · 2 ✖

tax_kingdom 1

  • Fungi · 2 ✖

tax_clade 1

bioproject 1

  • PRJNA703759 · 2 ✖

analysis 1

Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
26893207 26893207 PRJNA703759_P_NODE_34541_length_253_cov_0.866667_g34065_i0 PRJNA703759 34541 253 0.866667 2.19266751 Mycoemilia scoparia 417184 Fungi Fungi 45.8 0.00353   NR KAJ1914749.1 417184 g34065 i0 36.7 0.936758893280632 79 43 90.1 3 10 237 660 734 KAJ1914749.1 ubiquitin-binding SDF ubiquitin ligase complex subunit met30 [Mycoemilia scoparia] diamond 237 45.8 1 Eukaryota Opisthokonta Fungi Zoopagomycota Kickxellomycetes Kickxellales Kickxellaceae Mycoemilia Mycoemilia scoparia
27251940 27251940 PRJNA703759_P_NODE_40823_length_249_cov_0.886364_g40347_i0 PRJNA703759 40823 249 0.886364 2.20704636 root 1 Root_unresolved Root_unresolved 52.8 1.16e-5   NR KAJ1966624.1 1520584 g40347 i0 50 2.19277108433735 48 23 57.8 1 9 152 508 554 KAJ1966624.1 Mitochondrial fission protein [Dispira parvispora] diamond 546 52.8 1 Eukaryota Opisthokonta Fungi Zoopagomycota Dimargaritomycetes Dimargaritales Dimargaritaceae Dispira Dispira parvispora

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;