RNAquarium Metadata Server
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contig_metadata

1 row where bioproject = "PRJNA703759", tax_kingdom = "Bacillati" and tax_phylum = "Vulcanimicrobiota"

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tax_superkingdom 1

tax_phylum 1

  • Vulcanimicrobiota · 1 ✖

tax_kingdom 1

  • Bacillati · 1 ✖

bioproject 1

  • PRJNA703759 · 1 ✖

analysis 1

tax_clade 0

Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
31315171 31315171 PRJNA703759_P_NODE_51495_length_242_cov_0.923077_g51019_i0 PRJNA703759 51495 242 0.923077 2.23384634 Candidatus Elarobacter sp. 3047550 Bacteria Bacteria 73.2 6.33e-13   NR HTD27628.1 3047550 g51019 i0 48.8 2.97520661157025 80 41 99.2 0 2 241 247 326 HTD27628.1 sigma-70 family RNA polymerase sigma factor [Candidatus Elarobacter sp.] diamond 720 73.2 1 Bacteria   Bacillati Vulcanimicrobiota Vulcanimicrobiia Vulcanimicrobiales Vulcanimicrobiaceae Candidatus Elarobacter Candidatus Elarobacter sp.

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;