RNAquarium Metadata Server
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contig_metadata

2 rows where bioproject = "PRJNA703759", tax_clade = "FCB group" and tax_phylum = "Fibrobacterota"

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tax_superkingdom 1

tax_phylum 1

  • Fibrobacterota · 2 ✖

tax_kingdom 1

tax_clade 1

  • FCB group · 2 ✖

bioproject 1

  • PRJNA703759 · 2 ✖

analysis 1

Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
26734197 26734197 PRJNA703759_P_NODE_10581_length_415_cov_1.315789_g10105_i0 PRJNA703759 10581 415 1.315789 5.46052435 Fibrobacterota bacterium 2052160 Bacteria Bacteria 65.9 1.27e-9   NR MBW8890326.1 2052160 g10105 i0 54.7 1.91566265060241 53 24 38.3 0 413 255 248 300 MBW8890326.1 class I SAM-dependent methyltransferase [Fibrobacterota bacterium] diamond 795 65.9 1 Bacteria FCB group Pseudomonadati Fibrobacterota         Fibrobacterota bacterium
29388202 29388202 PRJNA703759_P_NODE_35209_length_253_cov_0.866667_g34733_i0 PRJNA703759 35209 253 0.866667 2.19266751 Fibrobacterota bacterium 2052160 Bacteria Bacteria 50.1 1.05e-4   NR QQS05459.1 2052160 g34733 i0 35.3 0.806324110671937 68 41 77.1 1 203 9 125 192 QQS05459.1 MAG: hypothetical protein IPK50_00835 [Fibrobacterota bacterium] diamond 204 50.1 1 Bacteria FCB group Pseudomonadati Fibrobacterota         Fibrobacterota bacterium

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;