RNAquarium Metadata Server
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contig_metadata

3 rows where bioproject = "PRJNA703759", tax_clade = "Discoba" and tax_phylum = "Euglenozoa"

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analysis 2

tax_superkingdom 1

tax_phylum 1

  • Euglenozoa · 3 ✖

tax_clade 1

  • Discoba · 3 ✖

bioproject 1

  • PRJNA703759 · 3 ✖

tax_kingdom 0

Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
21587161 21587161 PRJNA703759_P_NODE_34397_length_253_cov_0.866667_g33921_i0 PRJNA703759 34397 253 0.866667 2.19266751 Euglena 3038 Euglenozoa other_Eukaryota 52.8 0.023   NTclustered gi|30410708|ref|NC_001603.2| 3039 g33921 i0 100 0.221343873517787 28 0 11 0 27 54 13903 13930 Euglena gracilis chloroplast, complete genome blastn 56 52.8 1 Eukaryota Discoba   Euglenozoa Euglenida Euglenales Euglenaceae Euglena Euglena gracilis
28409268 28409268 PRJNA703759_P_NODE_32446_length_258_cov_2.156757_g31970_i0 PRJNA703759 32446 258 2.156757 5.56443306 Trypanosoma theileri 67003 Euglenozoa other_Eukaryota 44.3 0.013   NR XP_028878191.1 67003 g31970 i0 50 0.488372093023256 42 21 48.8 0 232 107 293 334 XP_028878191.1 uncharacterized protein TM35_000491310, partial [Trypanosoma theileri] diamond 126 44.3 1 Eukaryota Discoba   Euglenozoa Kinetoplastea Trypanosomatida Trypanosomatidae Trypanosoma Trypanosoma theileri
30220266 30220266 PRJNA703759_P_NODE_36632_length_252_cov_0.871508_g36156_i0 PRJNA703759 36632 252 0.871508 2.19620016 root 1 Root_unresolved Root_unresolved 46.6 0.00184   NR KAJ9448719.1 91374 g36156 i0 41.4 2.45238095238095 70 24 83.3 1 38 247 856 908 KAJ9448719.1 hypothetical protein DIPPA_02679 [Diplonema papillatum] diamond 618 46.6 1 Eukaryota Discoba   Euglenozoa Diplonemea   Diplonemidae Diplonema Diplonema papillatum

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;