RNAquarium Metadata Server
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contig_metadata

3 rows where bioproject = "PRJNA703759", tax_clade = "Bacteria candidate phyla" and tax_phylum = "Candidatus Altimarinota"

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tax_superkingdom 1

tax_phylum 1

  • Candidatus Altimarinota · 3 ✖

tax_clade 1

  • Bacteria candidate phyla · 3 ✖

bioproject 1

  • PRJNA703759 · 3 ✖

analysis 1

tax_kingdom 0

Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
9613040 9613040 PRJNA703759_P_NODE_36468_length_252_cov_0.871508_g35992_i0 PRJNA703759 36468 252 0.871508 2.19620016 Candidatus Altimarinota bacterium 2044595 Bacteria Bacteria 133 1.57e-34   NR MFA5947896.1 2044595 g35992 i0 79.5 6.91666666666667 83 17 98.8 0 3 251 249 331 MFA5947896.1 amidophosphoribosyltransferase [Candidatus Altimarinota bacterium] diamond 1743 133 1 Bacteria Bacteria candidate phyla   Candidatus Altimarinota         Candidatus Altimarinota bacterium
15987375 15987375 PRJNA703759_P_NODE_473_length_3912_cov_6.277676_g262_i0 PRJNA703759 473 3912 6.277676 245.58268512 Bacteria 2 Bacteria Bacteria 1200 0   NR MBP7898592.1 2044595 g262 i0 82.4 2.15260736196319 704 124 54 0 2954 843 1 704 MBP7898592.1 ribonucleoside triphosphate reductase [Candidatus Altimarinota bacterium] diamond 8421 1205 0.995850622406639 Bacteria Bacteria candidate phyla   Candidatus Altimarinota         Candidatus Altimarinota bacterium
31062528 31062528 PRJNA703759_P_NODE_575_length_3152_cov_6.167587_g333_i0 PRJNA703759 575 3152 6.167587 194.40234224 Candidatus Altimarinota bacterium 2044595 Bacteria Bacteria 504 7.779999999999999e-166   NR NRH21069.1 2044595 g333 i0 56.9 0.771890862944162 411 175 39 2 1425 196 21 430 NRH21069.1 hypothetical protein [Candidatus Altimarinota bacterium] diamond 2433 504 1 Bacteria Bacteria candidate phyla   Candidatus Altimarinota         Candidatus Altimarinota bacterium

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;