RNAquarium Metadata Server
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contig_metadata

2 rows where bioproject = "PRJNA702290" and tax_phylum = "Armatimonadota"

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tax_superkingdom 1

tax_phylum 1

  • Armatimonadota · 2 ✖

tax_kingdom 1

bioproject 1

  • PRJNA702290 · 2 ✖

analysis 1

tax_clade 0

Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
3234777 3234777 PRJNA702290_P_NODE_703_length_191_cov_15.664474_g695_i0 PRJNA702290 703 191 15.664474 29.91914534 uncultured Fimbriimonas sp. 1936177 Bacteria Bacteria 143 9.479999999999999e-30   NTclustered gi|1154724300|gb|KX379253.1| 1936177 g695 i0 100 45.9476439790576 77 0 79 0 4 80 1058 982 Uncultured Fimbriimonas sp. clone OD-9 16S ribosomal RNA gene, partial sequence blastn 8776 143 1 Bacteria   Bacillati Armatimonadota Fimbriimonadia Fimbriimonadales Fimbriimonadaceae Fimbriimonas uncultured Fimbriimonas sp.
9612270 9612270 PRJNA702290_P_NODE_608_length_191_cov_21.078947_g600_i0 PRJNA702290 608 191 21.078947 40.26078877 Armatimonadota bacterium 2033014 Bacteria Bacteria 126 9.54e-25   NTclustered gi|2314718026|dbj|AP024674.1| 2033014 g600 i0 97.297 84.4659685863874 74 2 39 0 115 188 1692871 1692798 MAG: Armatimonadetes bacterium KatS3mg024 DNA, complete genome blastn 16133 126 1 Bacteria   Bacillati Armatimonadota         Armatimonadota bacterium

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;