RNAquarium Metadata Server
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contig_metadata

9 rows where bioproject = "PRJNA700095" and tax_phylum = "Platyhelminthes"

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analysis 2

tax_superkingdom 1

tax_phylum 1

  • Platyhelminthes · 9 ✖

tax_kingdom 1

tax_clade 1

bioproject 1

  • PRJNA700095 · 9 ✖
Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
4511414 4511414 PRJNA700095_P_NODE_69284_length_226_cov_2.928105_g68019_i0 PRJNA700095 69284 226 2.928105 6.6175173 Schistosoma japonicum 6182 Platyhelminthes Platyhelminthes 366 6.32e-97   NTclustered gi|60598655|gb|AY809988.1| 6182 g68019 i0 99.02 100.194690265487 204 2 90 0 21 224 662 459 Schistosoma japonicum SJCHGC09533 protein mRNA, partial cds blastn 22644 366 1 Eukaryota Opisthokonta Metazoa Platyhelminthes Trematoda Strigeidida Schistosomatidae Schistosoma Schistosoma japonicum
15985763 15985763 PRJNA700095_P_NODE_27313_length_326_cov_22.517787_g26049_i0 PRJNA700095 27313 326 22.517787 73.40798562 Schistosoma japonicum 6182 Platyhelminthes Platyhelminthes 503 7.039999999999998e-138   NTclustered gi|56757963|gb|AY815390.1| 6182 g26049 i0 95.092 124.898773006135 326 5 100 2 1 326 1610 1924 Schistosoma japonicum SJCHGC01951 protein mRNA, complete cds blastn 40717 503 1 Eukaryota Opisthokonta Metazoa Platyhelminthes Trematoda Strigeidida Schistosomatidae Schistosoma Schistosoma japonicum
19810096 19810096 PRJNA700095_P_NODE_33916_length_293_cov_1.500000_g32652_i0 PRJNA700095 33916 293 1.5 4.395 Schistosoma japonicum 6182 Platyhelminthes Platyhelminthes 503 6.24e-138   NTclustered gi|60698688|gb|AY915747.1| 6182 g32652 i0 97.611 2.44027303754266 293 7 100 0 1 293 402 110 Schistosoma japonicum SJCHGC09661 protein mRNA, partial cds blastn 715 503 1 Eukaryota Opisthokonta Metazoa Platyhelminthes Trematoda Strigeidida Schistosomatidae Schistosoma Schistosoma japonicum
26841039 26841039 PRJNA700095_P_NODE_39941_length_276_cov_1.477833_g38677_i0 PRJNA700095 39941 276 1.477833 4.07881908 Metazoa 33208 Platyhelminthes Platyhelminthes 55.8 1.18e-6   NR VUZ55185.1 6216 g38677 i0 45.6 8.43478260869565 57 31 62 0 172 2 46 102 VUZ55185.1 unnamed protein product, partial [Hymenolepis diminuta] diamond 2328 55.8 1 Eukaryota Opisthokonta Metazoa Platyhelminthes Cestoda Cyclophyllidea Hymenolepididae Hymenolepis Hymenolepis diminuta
27504931 27504931 PRJNA700095_P_NODE_69963_length_216_cov_4.020979_g68698_i0 PRJNA700095 69963 216 4.020979 8.68531464 Schistosoma 6181 Platyhelminthes Platyhelminthes 46.2 0.00158   NR TNN08009.1 6182 g68698 i0 37.2 9.55555555555556 43 27 59.7 0 144 16 377 419 TNN08009.1 CCR4-NOT transcription complex subunit 11 isoform 1 [Schistosoma japonicum] diamond 2064 46.2 1 Eukaryota Opisthokonta Metazoa Platyhelminthes Trematoda Strigeidida Schistosomatidae Schistosoma Schistosoma japonicum
27683337 27683337 PRJNA700095_P_NODE_42264_length_270_cov_1.558376_g41000_i0 PRJNA700095 42264 270 1.558376 4.2076152 Calicophoron daubneyi 300641 Platyhelminthes Platyhelminthes 50.4 9.79e-5   NR CAL5135764.1 300641 g41000 i0 44.1 1.51111111111111 68 27 75.6 2 221 18 9 65 CAL5135764.1 unnamed protein product [Calicophoron daubneyi] diamond 408 50.4 1 Eukaryota Opisthokonta Metazoa Platyhelminthes Trematoda Plagiorchiida Paramphistomidae Calicophoron Calicophoron daubneyi
29746229 29746229 PRJNA700095_P_NODE_18350_length_418_cov_0.884058_g17087_i0 PRJNA700095 18350 418 0.884058 3.69536244 Eukaryota 2759 unresolved_Eukaryota other_Eukaryota 56.6 2.68e-6   NR VZI22467.1 99802 g17087 i0 27.8 10.0478468899522 126 83 90.4 3 3 380 141 258 VZI22467.1 unnamed protein product [Spirometra erinaceieuropaei] diamond 4200 57 0.992982456140351 Eukaryota Opisthokonta Metazoa Platyhelminthes Cestoda Diphyllobothriidea Diphyllobothriidae Spirometra Spirometra erinaceieuropaei
29893369 29893369 PRJNA700095_P_NODE_19171_length_406_cov_1.510511_g17908_i0 PRJNA700095 19171 406 1.510511 6.13267466 Schistosoma margrebowiei 48269 Platyhelminthes Platyhelminthes 108 2.9400000000000004e-27   NR VDP18829.1 48269 g17908 i0 52.6 2.15024630541872 97 44 71.7 1 398 108 35 129 VDP18829.1 unnamed protein product [Schistosoma margrebowiei] diamond 873 108 1 Eukaryota Opisthokonta Metazoa Platyhelminthes Trematoda Strigeidida Schistosomatidae Schistosoma Schistosoma margrebowiei
30504757 30504757 PRJNA700095_P_NODE_67053_length_236_cov_2.656442_g65789_i0 PRJNA700095 67053 236 2.656442 6.26920312 Diphyllobothriidae 28843 Platyhelminthes Platyhelminthes 66.6 2.55e-11   NR VDN09442.1 60516 g65789 i0 42.9 1.95762711864407 77 44 97.9 0 232 2 73 149 VDN09442.1 unnamed protein product, partial [Dibothriocephalus latus] diamond 462 66.6 1 Eukaryota Opisthokonta Metazoa Platyhelminthes Cestoda Diphyllobothriidea Diphyllobothriidae Dibothriocephalus Dibothriocephalus latus

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;