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contig_metadata

27 rows where bioproject = "PRJNA700095", tax_phylum = "Myxococcota" and tax_superkingdom = "Bacteria"

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analysis 2

tax_superkingdom 1

  • Bacteria · 27 ✖

tax_phylum 1

  • Myxococcota · 27 ✖

tax_kingdom 1

bioproject 1

  • PRJNA700095 · 27 ✖

tax_clade 0

Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
683264 683264 PRJNA700095_P_NODE_44761_length_264_cov_2.062827_g43497_i0 PRJNA700095 44761 264 2.062827 5.44586328 Deltaproteobacteria bacterium 2026735 Bacteria Bacteria 60.8 1.91e-8   NR MCZ6805859.1 2026735 g43497 i0 81.8 1.5 33 6 37.5 0 262 164 392 424 MCZ6805859.1 pyruvate dehydrogenase complex dihydrolipoamide acetyltransferase [Deltaproteobacteria bacterium] diamond 396 60.8 1 Bacteria   Pseudomonadati Myxococcota Myxococcia       Deltaproteobacteria bacterium
2459429 2459429 PRJNA700095_P_NODE_48362_length_257_cov_1.103261_g47098_i0 PRJNA700095 48362 257 1.103261 2.83538077 Corallococcus 83461 Bacteria Bacteria 436 5.52e-118   NTclustered gi|545790941|gb|KF270704.1| 35 g47098 i0 97.276 245.194552529183 257 7 100 0 1 257 876 620 Corallococcus macrosporus strain Ccm7 23S ribosomal RNA gene, partial sequence blastn 63015 436 1 Bacteria   Pseudomonadati Myxococcota Myxococcia Myxococcales Myxococcaceae Corallococcus Corallococcus macrosporus
7061767 7061767 PRJNA700095_P_NODE_33146_length_296_cov_2.304933_g31882_i0 PRJNA700095 33146 296 2.304933 6.82260168 Pyxidicoccus parkwayensis 2813578 Bacteria Bacteria 483 8.219999999999998e-132   NTclustered gi|1998505907|gb|CP071090.1| 2813578 g31882 i0 96.259 267.804054054054 294 11 99 0 1 294 2161209 2161502 Pyxidicoccus parkwaysis strain SCPEA02 chromosome blastn 79270 483 1 Bacteria   Pseudomonadati Myxococcota Myxococcia Myxococcales Myxococcaceae Pyxidicoccus Pyxidicoccus parkwayensis
27082737 27082737 PRJNA700095_P_NODE_24722_length_346_cov_2.249084_g23458_i0 PRJNA700095 24722 346 2.249084 7.78183064 Myxococcaceae bacterium 2484252 Bacteria Bacteria 179 6.089999999999999e-55   NR RYZ16037.1 2484252 g23458 i0 71.3 0.997109826589595 115 33 99.7 0 2 346 54 168 RYZ16037.1 MAG: formate--tetrahydrofolate ligase [Myxococcaceae bacterium] diamond 345 179 1 Bacteria   Pseudomonadati Myxococcota Myxococcia Myxococcales Myxococcaceae   Myxococcaceae bacterium
27272405 27272405 PRJNA700095_P_NODE_65003_length_241_cov_1.476190_g63739_i0 PRJNA700095 65003 241 1.47619 3.5576179 Deltaproteobacteria bacterium 2026735 Bacteria Bacteria 52.4 1.27e-5   NR MBW1756897.1 2026735 g63739 i0 39.3 1.51867219917012 61 34 75.9 2 55 237 28 85 MBW1756897.1 phosphotransferase [Deltaproteobacteria bacterium] diamond 366 52.4 1 Bacteria   Pseudomonadati Myxococcota Myxococcia       Deltaproteobacteria bacterium
27367534 27367534 PRJNA700095_P_NODE_50903_length_251_cov_2.146067_g49639_i0 PRJNA700095 50903 251 2.146067 5.38662817 Myxococcaceae bacterium 2484252 Bacteria Bacteria 92 4.05e-20   NR RYZ16325.1 2484252 g49639 i0 60.9 0.824701195219124 69 27 82.5 0 3 209 144 212 RYZ16325.1 MAG: solute carrier family 25 protein, partial [Myxococcaceae bacterium] diamond 207 92 1 Bacteria   Pseudomonadati Myxococcota Myxococcia Myxococcales Myxococcaceae   Myxococcaceae bacterium
27935619 27935619 PRJNA700095_P_NODE_10525_length_597_cov_3.572519_g9287_i0 PRJNA700095 10525 597 3.5725189999999998 21.32793843 Myxococcales bacterium 2026763 Bacteria Bacteria 84 1.68e-15   NR MBK7580488.1 2026763 g9287 i0 40.3 1.19597989949749 119 67 59.3 3 42 395 182 297 MBK7580488.1 endonuclease/exonuclease/phosphatase family protein [Myxococcales bacterium] diamond 714 84 1 Bacteria   Pseudomonadati Myxococcota Myxococcia Myxococcales     Myxococcales bacterium
27998930 27998930 PRJNA700095_P_NODE_7725_length_714_cov_2.070203_g6574_i0 PRJNA700095 7725 714 2.070203 14.78124942 Myxococcales bacterium 2026763 Bacteria Bacteria 101 1.37e-22   NR MEI7893546.1 2026763 g6574 i0 38.5 1.55042016806723 187 86 68.5 5 714 226 9 190 MEI7893546.1 WGR domain-containing protein [Myxococcales bacterium] diamond 1107 101 1 Bacteria   Pseudomonadati Myxococcota Myxococcia Myxococcales     Myxococcales bacterium
28187920 28187920 PRJNA700095_P_NODE_22066_length_371_cov_3.291946_g20802_i0 PRJNA700095 22066 371 3.291946 12.21311966 Polyangium sp. 15x6 3042687 Bacteria Bacteria 78.6 3.01e-14   NR WP_282422496.1 3042687 g20802 i0 36.2 2.02156334231806 127 65 97 5 10 369 201 318 WP_282422496.1 DUF4419 domain-containing protein [Polyangium sp. 15x6] diamond 750 78.6 1 Bacteria   Pseudomonadati Myxococcota   Polyangiales Polyangiaceae Polyangium Polyangium sp. 15x6
28377514 28377514 PRJNA700095_P_NODE_4266_length_954_cov_5.591373_g3363_i0 PRJNA700095 4266 954 5.591373 53.34169842 Myxococcales bacterium 2026763 Bacteria Bacteria 240 1.41e-69   NR MCA9658185.1 2026763 g3363 i0 42.8 1.37421383647799 276 144 85.5 3 131 946 14 279 MCA9658185.1 cupin-like domain-containing protein [Myxococcales bacterium] diamond 1311 240 1 Bacteria   Pseudomonadati Myxococcota Myxococcia Myxococcales     Myxococcales bacterium
28693535 28693535 PRJNA700095_P_NODE_13207_length_520_cov_1.986577_g11953_i0 PRJNA700095 13207 520 1.986577 10.3302004 Myxococcaceae bacterium 2484252 Bacteria Bacteria 198 6.960000000000001e-59   NR RYZ12755.1 2484252 g11953 i0 57.6 0.992307692307692 172 73 99.2 0 4 519 114 285 RYZ12755.1 MAG: hypothetical protein EOO70_08980, partial [Myxococcaceae bacterium] diamond 516 198 1 Bacteria   Pseudomonadati Myxococcota Myxococcia Myxococcales Myxococcaceae   Myxococcaceae bacterium
28693556 28693556 PRJNA700095_P_NODE_29287_length_314_cov_1.726141_g28023_i0 PRJNA700095 29287 314 1.726141 5.42008274 Myxococcaceae bacterium 2484252 Bacteria Bacteria 148 6.45e-39   NR RYZ17952.1 2484252 g28023 i0 69.7 1.04140127388535 109 26 99.4 2 2 313 1712 1818 RYZ17952.1 MAG: DUF3385 domain-containing protein, partial [Myxococcaceae bacterium] diamond 327 148 1 Bacteria   Pseudomonadati Myxococcota Myxococcia Myxococcales Myxococcaceae   Myxococcaceae bacterium
29009470 29009470 PRJNA700095_P_NODE_2268_length_1264_cov_3.078925_g1647_i0 PRJNA700095 2268 1264 3.078925 38.917612 Deltaproteobacteria bacterium 2026735 Bacteria Bacteria 140 2.16e-34   NR RYF04405.1 2026735 g1647 i0 46.5 0.377373417721519 159 70 34.2 2 309 740 130 288 RYF04405.1 MAG: hypothetical protein EOO40_11245, partial [Deltaproteobacteria bacterium] diamond 477 140 1 Bacteria   Pseudomonadati Myxococcota Myxococcia       Deltaproteobacteria bacterium
29356470 29356470 PRJNA700095_P_NODE_21909_length_373_cov_2.223333_g20645_i0 PRJNA700095 21909 373 2.223333 8.29303209 Deltaproteobacteria bacterium 2026735 Bacteria Bacteria 52.8 3.96e-5   NR RYF04405.1 2026735 g20645 i0 39.5 0.611260053619303 76 37 53.9 1 82 282 212 287 RYF04405.1 MAG: hypothetical protein EOO40_11245, partial [Deltaproteobacteria bacterium] diamond 228 52.8 1 Bacteria   Pseudomonadati Myxococcota Myxococcia       Deltaproteobacteria bacterium
30177434 30177434 PRJNA700095_P_NODE_11232_length_575_cov_1.318725_g9990_i0 PRJNA700095 11232 575 1.318725 7.58266875 Myxococcota bacterium 2818507 Bacteria Bacteria 150 1.17e-38   NR MEE8166805.1 2818507 g9990 i0 42.5 1.04347826086957 200 99 98.6 4 575 9 133 327 MEE8166805.1 long-chain-acyl-CoA synthetase [Myxococcota bacterium] diamond 600 150 1 Bacteria   Pseudomonadati Myxococcota         Myxococcota bacterium
30177440 30177440 PRJNA700095_P_NODE_2112_length_1300_cov_12.862266_g1522_i0 PRJNA700095 2112 1300 12.862266 167.209458 Enhygromyxa salina 215803 Bacteria Bacteria 202 1.1299999999999998e-56   NR WP_181234181.1 215803 g1522 i0 38.5 1.9361538461538499 400 210 87.2 18 1235 102 2 387 WP_181234181.1 phosphatidylinositol-specific phospholipase C [Enhygromyxa salina] diamond 2517 202 1 Bacteria   Pseudomonadati Myxococcota   Nannocystales Nannocystaceae Enhygromyxa Enhygromyxa salina
30682884 30682884 PRJNA700095_P_NODE_24573_length_347_cov_3.010949_g23309_i0 PRJNA700095 24573 347 3.010949 10.44799303 Myxococcota bacterium 2818507 Bacteria Bacteria 74.3 9.91e-14   NR MEL6347698.1 2818507 g23309 i0 41 0.717579250720461 83 49 71.8 0 26 274 9 91 MEL6347698.1 hypothetical protein [Myxococcota bacterium] diamond 249 74.3 1 Bacteria   Pseudomonadati Myxococcota         Myxococcota bacterium
30682900 30682900 PRJNA700095_P_NODE_5453_length_845_cov_5.009067_g4433_i0 PRJNA700095 5453 845 5.009067 42.32661615 Hyalangium minutum 394096 Bacteria Bacteria 282 1.1299999999999999e-90   NR WP_044191788.1 394096 g4433 i0 63 4.61538461538461 219 80 77.8 1 669 13 2 219 WP_044191788.1 zinc-dependent alcohol dehydrogenase [Hyalangium minutum] diamond 3900 282 1 Bacteria   Pseudomonadati Myxococcota Myxococcia Myxococcales Archangiaceae Hyalangium Hyalangium minutum
31441553 31441553 PRJNA700095_P_NODE_58536_length_246_cov_0.867052_g57272_i0 PRJNA700095 58536 246 0.867052 2.13294792 Deltaproteobacteria bacterium 2026735 Bacteria Bacteria 73.6 3.89e-14   NR MBV8451555.1 2026735 g57272 i0 75 0.98780487804878 40 10 48.8 0 244 125 112 151 MBV8451555.1 GNAT family N-acetyltransferase [Deltaproteobacteria bacterium] diamond 243 73.6 1 Bacteria   Pseudomonadati Myxococcota Myxococcia       Deltaproteobacteria bacterium
31579443 31579443 PRJNA700095_P_NODE_65996_length_241_cov_0.904762_g64732_i0 PRJNA700095 65996 241 0.904762 2.18047642 Myxococcota 2818505 Bacteria Bacteria 115 6.900000000000001e-28   NR MBW2529197.1 2026735 g64732 i0 69.2 1.91701244813278 78 24 97.1 0 234 1 105 182 MBW2529197.1 NAD-dependent dihydropyrimidine dehydrogenase subunit PreA [Deltaproteobacteria bacterium] diamond 462 116 0.991379310344828 Bacteria   Pseudomonadati Myxococcota Myxococcia       Deltaproteobacteria bacterium
31757868 31757868 PRJNA700095_P_NODE_52857_length_250_cov_0.864407_g51593_i0 PRJNA700095 52857 250 0.864407 2.1610175 Myxococcaceae bacterium 2484252 Bacteria Bacteria 114 2.02e-27   NR RYZ17952.1 2484252 g51593 i0 68.3 0.984 82 26 98.4 0 4 249 719 800 RYZ17952.1 MAG: DUF3385 domain-containing protein, partial [Myxococcaceae bacterium] diamond 246 114 1 Bacteria   Pseudomonadati Myxococcota Myxococcia Myxococcales Myxococcaceae   Myxococcaceae bacterium
31884358 31884358 PRJNA700095_P_NODE_40077_length_276_cov_0.866995_g38813_i0 PRJNA700095 40077 276 0.866995 2.3929062 Deltaproteobacteria bacterium 2026735 Bacteria Bacteria 66.2 1.46e-10   NR MCP3678314.1 2026735 g38813 i0 45.9 1.33695652173913 74 40 80.4 0 228 7 1 74 MCP3678314.1 hypothetical protein [Deltaproteobacteria bacterium] diamond 369 66.2 1 Bacteria   Pseudomonadati Myxococcota Myxococcia       Deltaproteobacteria bacterium
31979274 31979274 PRJNA700095_P_NODE_39778_length_276_cov_2.315271_g38514_i0 PRJNA700095 39778 276 2.315271 6.39014796 Haliangium sp. 2663208 Bacteria Bacteria 67.4 3.06e-11   NR HWN70294.1 2663208 g38514 i0 44.4 0.684782608695652 63 35 68.5 0 191 3 66 128 HWN70294.1 hypothetical protein [Haliangium sp.] diamond 189 67.4 1 Bacteria   Pseudomonadati Myxococcota   Haliangiales Kofleriaceae Haliangium Haliangium sp.
32528656 32528656 PRJNA700095_P_NODE_36679_length_284_cov_2.672986_g35415_i0 PRJNA700095 36679 284 2.672986 7.59128024 Pseudomonadati 3379134 Bacteria Bacteria 108 3.28e-25   NR HIO61209.1 2026735 g35415 i0 55.1 4.08802816901408 98 40 99.3 1 284 3 492 589 HIO61209.1 5-oxoprolinase [Deltaproteobacteria bacterium] diamond 1161 108 1 Bacteria   Pseudomonadati Myxococcota Myxococcia       Deltaproteobacteria bacterium
32749004 32749004 PRJNA700095_P_NODE_7160_length_745_cov_1.857143_g6035_i0 PRJNA700095 7160 745 1.857143 13.83571535 Pseudomonadati 3379134 Bacteria Bacteria 109 1.63e-24   NR WP_376762355.1 83451 g6035 i0 40.9 1.89261744966443 154 78 62 4 3 464 155 295 WP_376762355.1 aldo/keto reductase [Archangium violaceum] diamond 1410 109 1 Bacteria   Pseudomonadati Myxococcota Myxococcia Myxococcales Archangiaceae Archangium Archangium violaceum
32800697 32800697 PRJNA700095_P_NODE_21460_length_378_cov_2.747541_g20196_i0 PRJNA700095 21460 378 2.747541 10.38570498 Deltaproteobacteria bacterium 2026735 Bacteria Bacteria 91.7 2.3400000000000003e-21   NR MBK06606.1 2026735 g20196 i0 58.8 0.634920634920635 80 29 63.5 1 136 375 4 79 MBK06606.1 acyl-CoA-binding protein [Deltaproteobacteria bacterium] diamond 240 91.7 1 Bacteria   Pseudomonadati Myxococcota Myxococcia       Deltaproteobacteria bacterium
32895169 32895169 PRJNA700095_P_NODE_20160_length_393_cov_3.328125_g18897_i0 PRJNA700095 20160 393 3.328125 13.07953125 Myxococcaceae bacterium 2484252 Bacteria Bacteria 96.3 2.19e-22   NR RYZ15473.1 2484252 g18897 i0 51.6 0.694656488549618 91 44 69.5 0 287 15 16 106 RYZ15473.1 MAG: ankyrin repeat domain-containing protein [Myxococcaceae bacterium] diamond 273 96.3 1 Bacteria   Pseudomonadati Myxococcota Myxococcia Myxococcales Myxococcaceae   Myxococcaceae bacterium

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;