RNAquarium Metadata Server
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contig_metadata

2 rows where bioproject = "PRJNA700095" and tax_phylum = "Fidelibacterota"

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tax_superkingdom 1

tax_phylum 1

  • Fidelibacterota · 2 ✖

tax_kingdom 1

tax_clade 1

bioproject 1

  • PRJNA700095 · 2 ✖

analysis 1

Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
26639561 26639561 PRJNA700095_P_NODE_28001_length_322_cov_1.638554_g26737_i0 PRJNA700095 28001 322 1.638554 5.27614388 Fidelibacterota bacterium 2026760 Bacteria Bacteria 45.8 0.00695   NR HDY75610.1 2026760 g26737 i0 27.7 0.875776397515528 94 53 82.9 3 269 3 217 300 HDY75610.1 DUF4346 domain-containing protein [Fidelibacterota bacterium] diamond 282 45.8 1 Bacteria FCB group Pseudomonadati Fidelibacterota         Fidelibacterota bacterium
32200891 32200891 PRJNA700095_P_NODE_3578_length_1038_cov_2.363731_g2747_i0 PRJNA700095 3578 1038 2.363731 24.53552778 Fidelibacterota bacterium 2026760 Bacteria Bacteria 311 1e-96   NR MBO8152981.1 2026760 g2747 i0 50 2.67052023121387 308 149 88.7 4 1033 113 393 696 MBO8152981.1 S9 family peptidase [Fidelibacterota bacterium] diamond 2772 311 1 Bacteria FCB group Pseudomonadati Fidelibacterota         Fidelibacterota bacterium

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;