RNAquarium Metadata Server
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contig_metadata

10 rows where bioproject = "PRJNA700095" and tax_phylum = "Echinodermata"

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analysis 2

tax_superkingdom 1

tax_phylum 1

  • Echinodermata · 10 ✖

tax_kingdom 1

tax_clade 1

bioproject 1

  • PRJNA700095 · 10 ✖
Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
8336543 8336543 PRJNA700095_P_NODE_68227_length_231_cov_2.044304_g66962_i0 PRJNA700095 68227 231 2.044304 4.72234224 Lytechinus pictus 7653 Echinodermata other_Eukaryota 54.7 0.006   NTclustered gi|2707362230|ref|XM_064107634.1| 7653 g66962 i0 94.444 0.155844155844156 36 1 15 1 6 40 2481 2446 PREDICTED: Lytechinus pictus transient receptor potential cation channel subfamily A member 1 homolog (LOC129272398), mRNA blastn 36 54.7 1 Eukaryota Opisthokonta Metazoa Echinodermata Echinoidea Temnopleuroida Toxopneustidae Lytechinus Lytechinus pictus
13437018 13437018 PRJNA700095_P_NODE_51871_length_250_cov_2.474576_g50607_i0 PRJNA700095 51871 250 2.474576 6.18644 Strongylocentrotus purpuratus 7668 Echinodermata other_Eukaryota 54.7 0.006   NTclustered gi|1752346178|ref|XM_781172.5| 7668 g50607 i0 96.875 0.256 32 1 13 0 194 225 3310 3341 PREDICTED: Strongylocentrotus purpuratus trichohyalin (LOC581159), transcript variant X1, mRNA blastn 64 54.7 1 Eukaryota Opisthokonta Metazoa Echinodermata Echinoidea Camarodonta Strongylocentrotidae Strongylocentrotus Strongylocentrotus purpuratus
21586411 21586411 PRJNA700095_P_NODE_20197_length_393_cov_1.393750_g18934_i0 PRJNA700095 20197 393 1.39375 5.4774375 Metazoa 33208 Echinodermata other_Eukaryota 52.8 0.038   NTclustered gi|2037917966|ref|XM_041605365.1| 7654 g18934 i0 100 0.427480916030534 28 0 7 0 263 290 1285 1258 PREDICTED: Lytechinus variegatus proteolipid protein DM beta-like (LOC121412574), mRNA blastn 168 52.8 1 Eukaryota Opisthokonta Metazoa Echinodermata Echinoidea Temnopleuroida Toxopneustidae Lytechinus Lytechinus variegatus
27125155 27125155 PRJNA700095_P_NODE_13862_length_503_cov_4.565116_g12603_i0 PRJNA700095 13862 503 4.565116 22.96253348 Metazoa 33208 Echinodermata other_Eukaryota 79.3 1e-13   NR XP_030848995.1 7668 g12603 i0 39.8 2.05168986083499 98 52 57.9 2 188 478 405 496 XP_030848995.1 uncharacterized protein LOC100894123 [Strongylocentrotus purpuratus] diamond 1032 79.3 1 Eukaryota Opisthokonta Metazoa Echinodermata Echinoidea Camarodonta Strongylocentrotidae Strongylocentrotus Strongylocentrotus purpuratus
27315341 27315341 PRJNA700095_P_NODE_48583_length_256_cov_1.683060_g47319_i0 PRJNA700095 48583 256 1.68306 4.3086336 Eukaryota 2759 unresolved_Eukaryota other_Eukaryota 70.1 1.02e-11   NR XP_071491735.1 105358 g47319 i0 42.3 1.9453125 78 31 87.9 2 26 250 182 248 XP_071491735.1 delta(14)-sterol reductase TM7SF2-like [Diadema antillarum] diamond 498 70.1 1 Eukaryota Opisthokonta Metazoa Echinodermata Echinoidea Diadematoida Diadematidae Diadema Diadema antillarum
28010110 28010110 PRJNA700095_P_NODE_52345_length_250_cov_0.870056_g51081_i0 PRJNA700095 52345 250 0.870056 2.17514 root 1 Root_unresolved Root_unresolved 49.7 1.46e-4   NR XP_033643116.1 7604 g51081 i0 33.3 2.592 72 47 86.4 1 220 5 196 266 XP_033643116.1 NADPH-dependent diflavin oxidoreductase 1-like [Asterias rubens] diamond 648 49.7 1 Eukaryota Opisthokonta Metazoa Echinodermata Asteroidea Forcipulatida Asteriidae Asterias Asterias rubens
28104470 28104470 PRJNA700095_P_NODE_46865_length_260_cov_1.229947_g45601_i0 PRJNA700095 46865 260 1.229947 3.1978622 root 1 Root_unresolved Root_unresolved 59.7 4.83e-8   NR XP_033626464.1 7604 g45601 i0 34.2 5.60769230769231 79 34 91.2 1 240 4 312 372 XP_033626464.1 peroxidase 2-like [Asterias rubens] diamond 1458 60.1 0.993344425956739 Eukaryota Opisthokonta Metazoa Echinodermata Asteroidea Forcipulatida Asteriidae Asterias Asterias rubens
29356467 29356467 PRJNA700095_P_NODE_14269_length_494_cov_1.451306_g13010_i0 PRJNA700095 14269 494 1.451306 7.16945164 Lytechinus variegatus 7654 Echinodermata other_Eukaryota 48.1 0.00469   NR XP_041457912.1 7654 g13010 i0 36.5 0.449392712550607 74 46 44.9 1 26 247 226 298 XP_041457912.1 uncharacterized protein LOC121410105 [Lytechinus variegatus] diamond 222 48.1 1 Eukaryota Opisthokonta Metazoa Echinodermata Echinoidea Temnopleuroida Toxopneustidae Lytechinus Lytechinus variegatus
30493539 30493539 PRJNA700095_P_NODE_12953_length_526_cov_3.701987_g11701_i0 PRJNA700095 12953 526 3.701987 19.47245162 Lytechinus variegatus 7654 Echinodermata other_Eukaryota 89.7 3.1e-17   NR XP_041466350.1 7654 g11701 i0 44.2 0.684410646387833 120 55 67.3 4 151 504 409 518 XP_041466350.1 uncharacterized protein LOC121416889 [Lytechinus variegatus] diamond 360 89.7 1 Eukaryota Opisthokonta Metazoa Echinodermata Echinoidea Temnopleuroida Toxopneustidae Lytechinus Lytechinus variegatus
31358005 31358005 PRJNA700095_P_NODE_64676_length_241_cov_2.827381_g63412_i0 PRJNA700095 64676 241 2.827381 6.81398821 Metazoa 33208 Echinodermata other_Eukaryota 102 7.83e-25   NR XP_033627614.1 7604 g63412 i0 58.2 6.88381742738589 79 32 98.3 1 3 239 49 126 XP_033627614.1 GTP-binding nuclear protein Ran-like [Asterias rubens] diamond 1659 102 1 Eukaryota Opisthokonta Metazoa Echinodermata Asteroidea Forcipulatida Asteriidae Asterias Asterias rubens

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;